Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.57□□□□□ -2
TNFRSF4P43489 AL592045.1-201ENST00000429867 352 ntBASIC2.57□□□□□ -2
TNFRSF4P43489 AL353706.1-201ENST00000436728 494 ntBASIC2.57□□□□□ -2
TNFRSF4P43489 USP9YP15-201ENST00000442391 422 ntBASIC2.57□□□□□ -2
TNFRSF4P43489 MTND6P13-201ENST00000443510 523 ntBASIC2.57□□□□□ -2
TNFRSF4P43489 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.57□□□□□ -2
TNFRSF4P43489 SNORD42A-201ENST00000459584 64 ntBASIC2.57□□□□□ -2
TNFRSF4P43489 MTCO2P29-201ENST00000465212 189 ntBASIC2.57□□□□□ -2
TNFRSF4P43489 YWHAEP4-201ENST00000505390 198 ntBASIC2.57□□□□□ -2
TNFRSF4P43489 ARL2BPP4-201ENST00000506854 471 ntBASIC2.57□□□□□ -2
TNFRSF4P43489 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.57□□□□□ -2
TNFRSF4P43489 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.57□□□□□ -2
TNFRSF4P43489 Y_RNA.672-201ENST00000516289 104 ntBASIC2.57□□□□□ -2
TNFRSF4P43489 SNORA18.6-201ENST00000516792 115 ntBASIC2.57□□□□□ -2
TNFRSF4P43489 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.57□□□□□ -2
TNFRSF4P43489 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.57□□□□□ -2
TNFRSF4P43489 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.57□□□□□ -2
TNFRSF4P43489 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.57□□□□□ -2
TNFRSF4P43489 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.57□□□□□ -2
TNFRSF4P43489 AC064807.4-201ENST00000607201 407 ntBASIC2.57□□□□□ -2
TNFRSF4P43489 AC006566.1-201ENST00000608943 513 ntBASIC2.57□□□□□ -2
TNFRSF4P43489 AP001506.1-201ENST00000615444 211 ntBASIC2.57□□□□□ -2
TNFRSF4P43489 MTND5P42-201ENST00000637720 498 ntBASIC2.57□□□□□ -2
TNFRSF4P43489 ZNF658B-202ENST00000615961 3375 ntBASIC2.57□□□□□ -2
TNFRSF4P43489 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.56□□□□□ -2
TNFRSF4P43489 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 AC108206.1-201ENST00000570186 4159 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
TNFRSF4P43489 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.56□□□□□ -2
TNFRSF4P43489 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TNFRSF4P43489 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.56□□□□□ -2
TNFRSF4P43489 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
TNFRSF4P43489 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
TNFRSF4P43489 RNU6-960P-201ENST00000364056 120 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 RNU6-1180P-201ENST00000364935 107 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 RNU6-658P-201ENST00000384606 106 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 RNU6-297P-201ENST00000384636 107 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 MIR592-201ENST00000384959 97 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 MIR627-201ENST00000384979 97 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 AL359511.1-201ENST00000402970 211 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.56□□□□□ -2
TNFRSF4P43489 AL589872.1-201ENST00000426602 288 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.56□□□□□ -2
TNFRSF4P43489 AC073614.1-201ENST00000438690 650 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 MTATP6P7-201ENST00000453315 681 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 SRIP1-201ENST00000489235 288 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 AC026801.1-201ENST00000497178 464 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.56□□□□□ -2
TNFRSF4P43489 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.56□□□□□ -2
TNFRSF4P43489 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 AC024909.2-201ENST00000553035 286 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.56□□□□□ -2
TNFRSF4P43489 AC103810.1-201ENST00000579873 453 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 MIR3682-201ENST00000581338 84 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.56□□□□□ -2
TNFRSF4P43489 AL139286.2-201ENST00000606838 396 ntBASIC2.56□□□□□ -2
TNFRSF4P43489 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.56□□□□□ -2
TNFRSF4P43489 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.56□□□□□ -2
TNFRSF4P43489 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.55□□□□□ -2
TNFRSF4P43489 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TNFRSF4P43489 RNA5SP289-201ENST00000362332 137 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 SNORD56.2-201ENST00000363242 71 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 RNU4-24P-201ENST00000364565 139 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 SNORA51.4-201ENST00000364993 124 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.55□□□□□ -2
TNFRSF4P43489 Y_RNA.559-201ENST00000384686 107 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.55□□□□□ -2
TNFRSF4P43489 SNORA3.2-201ENST00000408221 125 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 RNU2-8P-201ENST00000410727 190 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 RNU4-53P-201ENST00000410828 140 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 RNU6-195P-201ENST00000411352 109 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 ISCA1P6-201ENST00000427740 390 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 AC093106.2-201ENST00000428212 385 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 AL591212.2-201ENST00000433923 257 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.55□□□□□ -2
TNFRSF4P43489 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.55□□□□□ -2
TNFRSF4P43489 AC244505.5-201ENST00000443639 207 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 MTCO2P7-201ENST00000446518 666 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 AC093899.1-201ENST00000457984 376 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.55□□□□□ -2
TNFRSF4P43489 ADAM3A-203ENST00000461344 2157 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.55□□□□□ -2
TNFRSF4P43489 AC103975.1-201ENST00000482506 483 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 RPL23AP70-201ENST00000483361 460 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 AC139453.3-201ENST00000493276 369 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 RN7SL636P-201ENST00000497504 294 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.55□□□□□ -2
TNFRSF4P43489 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.55□□□□□ -2
TNFRSF4P43489 AC079140.3-201ENST00000511111 550 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.55□□□□□ -2
TNFRSF4P43489 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.55□□□□□ -2
TNFRSF4P43489 RNU2-46P-201ENST00000517038 113 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.55□□□□□ -2
TNFRSF4P43489 AC024619.4-201ENST00000580924 316 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 MTND4P35-201ENST00000604257 1375 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 AC098614.4-201ENST00000607601 462 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms