Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RPL23AP24-201ENST00000458203 385 ntBASIC4.32□□□□□ -1.72
CCNFP41002 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.32□□□□□ -1.72
CCNFP41002 snoU109.2-201ENST00000459316 135 ntBASIC4.32□□□□□ -1.72
CCNFP41002 RPL21P13-201ENST00000488305 481 ntBASIC4.32□□□□□ -1.72
CCNFP41002 RPL22P13-201ENST00000493291 347 ntBASIC4.32□□□□□ -1.72
CCNFP41002 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CCNFP41002 Y_RNA.715-201ENST00000517082 110 ntBASIC4.32□□□□□ -1.72
CCNFP41002 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.32□□□□□ -1.72
CCNFP41002 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.32□□□□□ -1.72
CCNFP41002 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.32□□□□□ -1.72
CCNFP41002 AC004584.2-201ENST00000570407 410 ntBASIC4.32□□□□□ -1.72
CCNFP41002 AC016727.2-201ENST00000603988 621 ntBASIC4.32□□□□□ -1.72
CCNFP41002 Z98751.3-201ENST00000604447 521 ntBASIC4.32□□□□□ -1.72
CCNFP41002 AC012603.1-201ENST00000606424 528 ntBASIC4.32□□□□□ -1.72
CCNFP41002 AC064801.1-201ENST00000612025 407 ntBASIC4.32□□□□□ -1.72
CCNFP41002 AL161629.2-201ENST00000615347 275 ntBASIC4.32□□□□□ -1.72
CCNFP41002 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.32□□□□□ -1.72
CCNFP41002 AP000346.3-201ENST00000622821 210 ntBASIC4.32□□□□□ -1.72
CCNFP41002 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.32□□□□□ -1.72
CCNFP41002 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.32□□□□□ -1.72
CCNFP41002 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCNFP41002 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCNFP41002 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CCNFP41002 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCNFP41002 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCNFP41002 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCNFP41002 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCNFP41002 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.31□□□□□ -1.72
CCNFP41002 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCNFP41002 Y_RNA.556-201ENST00000384677 113 ntBASIC4.31□□□□□ -1.72
CCNFP41002 MIR34A-201ENST00000385130 110 ntBASIC4.31□□□□□ -1.72
CCNFP41002 AL591034.2-201ENST00000402839 359 ntBASIC4.31□□□□□ -1.72
CCNFP41002 MIR1252-201ENST00000408861 65 ntBASIC4.31□□□□□ -1.72
CCNFP41002 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.31□□□□□ -1.72
CCNFP41002 RPL7P2-201ENST00000427639 268 ntBASIC4.31□□□□□ -1.72
CCNFP41002 MTND3P9-201ENST00000429526 346 ntBASIC4.31□□□□□ -1.72
CCNFP41002 RPS6P12-201ENST00000432491 726 ntBASIC4.31□□□□□ -1.72
CCNFP41002 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.31□□□□□ -1.72
CCNFP41002 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.31□□□□□ -1.72
CCNFP41002 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.31□□□□□ -1.72
CCNFP41002 ANP32BP2-201ENST00000454525 545 ntBASIC4.31□□□□□ -1.72
CCNFP41002 RPS29P33-201ENST00000456717 146 ntBASIC4.31□□□□□ -1.72
CCNFP41002 snoU13.1-201ENST00000459157 104 ntBASIC4.31□□□□□ -1.72
CCNFP41002 RPL21P126-201ENST00000470049 478 ntBASIC4.31□□□□□ -1.72
CCNFP41002 AC006517.1-201ENST00000480485 328 ntBASIC4.31□□□□□ -1.72
CCNFP41002 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCNFP41002 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.31□□□□□ -1.72
CCNFP41002 RAB9BP1-201ENST00000519581 626 ntBASIC4.31□□□□□ -1.72
CCNFP41002 AP005902.1-201ENST00000521358 186 ntBASIC4.31□□□□□ -1.72
CCNFP41002 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.31□□□□□ -1.72
CCNFP41002 AMZ2P1-203ENST00000565833 850 ntBASIC4.31□□□□□ -1.72
CCNFP41002 MIR4715-201ENST00000584117 79 ntBASIC4.31□□□□□ -1.72
CCNFP41002 AC079587.1-201ENST00000603846 277 ntBASIC4.31□□□□□ -1.72
CCNFP41002 AP000787.2-201ENST00000604432 568 ntBASIC4.31□□□□□ -1.72
CCNFP41002 MTND4LP5-201ENST00000605152 292 ntBASIC4.31□□□□□ -1.72
CCNFP41002 AC004805.2-201ENST00000605382 482 ntBASIC4.31□□□□□ -1.72
CCNFP41002 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCNFP41002 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCNFP41002 AC010733.2-201ENST00000589496 5702 ntBASIC4.31□□□□□ -1.72
CCNFP41002 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCNFP41002 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCNFP41002 MTND5P9-201ENST00000503854 1755 ntBASIC4.3□□□□□ -1.72
CCNFP41002 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCNFP41002 RN7SKP227-201ENST00000364445 330 ntBASIC4.3□□□□□ -1.72
CCNFP41002 MIR325-201ENST00000385260 98 ntBASIC4.3□□□□□ -1.72
CCNFP41002 MT-TG-201ENST00000387429 68 ntBASIC4.3□□□□□ -1.72
CCNFP41002 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.3□□□□□ -1.72
CCNFP41002 CRYBB2P1-203ENST00000415709 538 ntBASIC4.3□□□□□ -1.72
CCNFP41002 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.3□□□□□ -1.72
CCNFP41002 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.3□□□□□ -1.72
CCNFP41002 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.3□□□□□ -1.72
CCNFP41002 NDUFB1P2-201ENST00000449477 176 ntBASIC4.3□□□□□ -1.72
CCNFP41002 SNRPGP5-201ENST00000456003 220 ntBASIC4.3□□□□□ -1.72
CCNFP41002 RN7SL810P-201ENST00000493031 276 ntBASIC4.3□□□□□ -1.72
CCNFP41002 AC146944.2-203ENST00000502493 354 ntBASIC4.3□□□□□ -1.72
CCNFP41002 MTND4LP22-201ENST00000508209 276 ntBASIC4.3□□□□□ -1.72
CCNFP41002 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.3□□□□□ -1.72
CCNFP41002 AC139495.1-202ENST00000513164 354 ntBASIC4.3□□□□□ -1.72
CCNFP41002 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.3□□□□□ -1.72
CCNFP41002 RNU6-794P-201ENST00000517261 64 ntBASIC4.3□□□□□ -1.72
CCNFP41002 AC144568.1-201ENST00000520139 137 ntBASIC4.3□□□□□ -1.72
CCNFP41002 IGKV2D-19-201ENST00000523346 262 ntBASIC4.3□□□□□ -1.72
CCNFP41002 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCNFP41002 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
CCNFP41002 AC107016.1-201ENST00000550463 337 ntBASIC4.3□□□□□ -1.72
CCNFP41002 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.3□□□□□ -1.72
CCNFP41002 AL645944.1-201ENST00000603857 493 ntBASIC4.3□□□□□ -1.72
CCNFP41002 AL021879.1-201ENST00000611756 288 ntBASIC4.3□□□□□ -1.72
CCNFP41002 MIR378J-201ENST00000611988 109 ntBASIC4.3□□□□□ -1.72
CCNFP41002 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CCNFP41002 U6.99-201ENST00000637524 83 ntBASIC4.3□□□□□ -1.72
CCNFP41002 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.3□□□□□ -1.72
CCNFP41002 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.3□□□□□ -1.72
CCNFP41002 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCNFP41002 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCNFP41002 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCNFP41002 MTND5P27-201ENST00000428871 1720 ntBASIC4.29□□□□□ -1.72
CCNFP41002 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CCNFP41002 RNU6-428P-201ENST00000362942 107 ntBASIC4.29□□□□□ -1.72
CCNFP41002 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms