Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.68□□□□□ -2.14
COL18A1P39060 AL139109.1-201ENST00000455491 297 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.68□□□□□ -2.14
COL18A1P39060 MRPS36P2-201ENST00000512569 299 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 AC008837.2-201ENST00000513076 418 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 RNU6-714P-201ENST00000516963 103 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 AC019176.1-201ENST00000518519 225 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
COL18A1P39060 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.68□□□□□ -2.14
COL18A1P39060 AL132657.2-201ENST00000564417 358 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 MIR4285-201ENST00000581001 85 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 AL353997.4-201ENST00000586196 166 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.68□□□□□ -2.14
COL18A1P39060 AL158211.2-201ENST00000607282 395 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 AC103710.4-201ENST00000609301 899 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.68□□□□□ -2.14
COL18A1P39060 AL445264.1-201ENST00000621719 171 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.68□□□□□ -2.14
COL18A1P39060 MIR7515-201ENST00000637837 67 ntBASIC1.68□□□□□ -2.14
COL18A1P39060 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
COL18A1P39060 Y_RNA.30-201ENST00000362572 97 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.67□□□□□ -2.14
COL18A1P39060 SEPT2P1-201ENST00000419651 180 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.67□□□□□ -2.14
COL18A1P39060 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.67□□□□□ -2.14
COL18A1P39060 RNU7-136P-201ENST00000458819 69 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 SUMO2P6-201ENST00000505273 288 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 ARL2BPP4-201ENST00000506854 471 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 AC021146.8-201ENST00000507455 733 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 AC113347.3-201ENST00000509113 148 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.67□□□□□ -2.14
COL18A1P39060 AC087465.1-201ENST00000560574 245 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 AC023824.2-201ENST00000566185 400 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 BNIP3P26-201ENST00000600827 554 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 BBIP1P1-201ENST00000602999 279 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 RNU6-97P-201ENST00000363387 104 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 MIR888-201ENST00000401186 77 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 AL356421.1-201ENST00000403255 413 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 RNU6-516P-201ENST00000411381 104 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.67□□□□□ -2.14
COL18A1P39060 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.67□□□□□ -2.14
COL18A1P39060 ZNF863P-201ENST00000426746 417 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 Z80107.1-201ENST00000436830 412 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 MTCO2P25-201ENST00000447065 681 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 AC092902.1-201ENST00000486999 259 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
COL18A1P39060 RNU6-840P-201ENST00000517275 65 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 AC007115.1-201ENST00000546853 234 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 AL391261.3-201ENST00000557194 520 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.67□□□□□ -2.14
COL18A1P39060 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.67□□□□□ -2.14
COL18A1P39060 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.67□□□□□ -2.14
COL18A1P39060 HMGN2P15-201ENST00000585707 270 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 OR1M4P-201ENST00000589199 287 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 AC021749.1-201ENST00000604322 607 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.67□□□□□ -2.14
COL18A1P39060 AC008498.1-201ENST00000613012 531 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 AC104763.3-201ENST00000613765 618 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 AC023158.2-201ENST00000614876 543 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 AC245884.12-201ENST00000615364 59 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 AL603758.1-201ENST00000618654 241 ntBASIC1.67□□□□□ -2.14
COL18A1P39060 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.66□□□□□ -2.14
COL18A1P39060 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.66□□□□□ -2.14
COL18A1P39060 RNU1-52P-201ENST00000384190 164 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 RNU6-1207P-201ENST00000384343 107 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 MIR144-201ENST00000384886 86 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 Z75741.2-201ENST00000417272 1167 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 HMGB1P49-201ENST00000418882 569 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 HMGN2P38-201ENST00000423806 265 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.66□□□□□ -2.14
COL18A1P39060 AL160314.1-201ENST00000490836 438 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.66□□□□□ -2.14
COL18A1P39060 SUMO2P5-201ENST00000506790 245 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.66□□□□□ -2.14
COL18A1P39060 AC022447.1-201ENST00000515358 464 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 FABP5P5-201ENST00000515537 406 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 NRON-201ENST00000517270 370 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.66□□□□□ -2.14
COL18A1P39060 NACAP3-201ENST00000552100 481 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 RPL21P5-201ENST00000554662 472 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 AC090616.3-201ENST00000582184 217 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.66□□□□□ -2.14
COL18A1P39060 AC007229.1-201ENST00000590455 412 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 MTND4LP5-201ENST00000605152 292 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 AC239868.4-201ENST00000608318 671 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 AC010133.1-201ENST00000615809 842 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 AL138713.1-201ENST00000624026 2130 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 AL390862.1-201ENST00000635467 1469 ntBASIC1.66□□□□□ -2.14
COL18A1P39060 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
COL18A1P39060 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.66□□□□□ -2.14
COL18A1P39060 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
COL18A1P39060 RNU6-560P-201ENST00000364007 108 ntBASIC1.65□□□□□ -2.14
COL18A1P39060 SNORA6-201ENST00000384033 151 ntBASIC1.65□□□□□ -2.14
COL18A1P39060 Y_RNA.548-201ENST00000384656 105 ntBASIC1.65□□□□□ -2.14
COL18A1P39060 AL109755.1-201ENST00000401791 649 ntBASIC1.65□□□□□ -2.14
COL18A1P39060 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.65□□□□□ -2.14
COL18A1P39060 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.65□□□□□ -2.14
COL18A1P39060 MTND5P25-201ENST00000430499 799 ntBASIC1.65□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms