Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AL357134.1-201ENST00000445848 426 ntBASIC1.72□□□□□ -2.13
CASQ1P31415 AC023790.1-201ENST00000482174 347 ntBASIC1.72□□□□□ -2.13
CASQ1P31415 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.72□□□□□ -2.13
CASQ1P31415 AC109927.2-201ENST00000506416 303 ntBASIC1.72□□□□□ -2.13
CASQ1P31415 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.72□□□□□ -2.13
CASQ1P31415 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.72□□□□□ -2.13
CASQ1P31415 DPPA3P3-201ENST00000603842 430 ntBASIC1.72□□□□□ -2.13
CASQ1P31415 AC096772.1-201ENST00000609146 564 ntBASIC1.72□□□□□ -2.13
CASQ1P31415 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.72□□□□□ -2.13
CASQ1P31415 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.72□□□□□ -2.13
CASQ1P31415 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.72□□□□□ -2.13
CASQ1P31415 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
CASQ1P31415 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
CASQ1P31415 RBBP8P1-201ENST00000449447 1844 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.71□□□□□ -2.14
CASQ1P31415 RNA5SP387-201ENST00000364226 106 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 RNU6-207P-201ENST00000384137 107 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 AL079342.2-201ENST00000403367 482 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 RNA5SP425-201ENST00000410336 112 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 RPL21P24-201ENST00000413752 448 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 AC104651.1-201ENST00000427559 735 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.71□□□□□ -2.14
CASQ1P31415 HSPE1P24-201ENST00000450782 238 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.71□□□□□ -2.14
CASQ1P31415 AC112492.4-201ENST00000456549 352 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 MTCYBP16-201ENST00000509187 1129 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 AC135279.1-201ENST00000543493 504 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 SNRPGP1-201ENST00000553864 222 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 AL731537.2-201ENST00000561565 951 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 RPL30P11-203ENST00000598995 310 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 CYP2C61P-201ENST00000604072 290 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 AL670379.10-201ENST00000604330 253 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 AL670379.9-201ENST00000605428 253 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 AC092447.10-201ENST00000620607 1652 ntBASIC1.71□□□□□ -2.14
CASQ1P31415 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CASQ1P31415 RN7SKP223-201ENST00000410582 62 ntBASIC1.7□□□□□ -2.14
CASQ1P31415 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.7□□□□□ -2.14
CASQ1P31415 RPL18AP17-201ENST00000455326 198 ntBASIC1.7□□□□□ -2.14
CASQ1P31415 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.7□□□□□ -2.14
CASQ1P31415 RPS29P23-201ENST00000458635 123 ntBASIC1.7□□□□□ -2.14
CASQ1P31415 AC023194.1-201ENST00000493084 308 ntBASIC1.7□□□□□ -2.14
CASQ1P31415 MTCYBP43-201ENST00000513621 740 ntBASIC1.7□□□□□ -2.14
CASQ1P31415 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.7□□□□□ -2.14
CASQ1P31415 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.7□□□□□ -2.14
CASQ1P31415 MTATP6P25-201ENST00000574491 261 ntBASIC1.7□□□□□ -2.14
CASQ1P31415 MIR4782-201ENST00000577987 79 ntBASIC1.7□□□□□ -2.14
CASQ1P31415 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.7□□□□□ -2.14
CASQ1P31415 MIR5708-201ENST00000579723 85 ntBASIC1.7□□□□□ -2.14
CASQ1P31415 AC004987.4-201ENST00000603383 338 ntBASIC1.7□□□□□ -2.14
CASQ1P31415 PRR13P7-201ENST00000605538 430 ntBASIC1.7□□□□□ -2.14
CASQ1P31415 AC107952.2-201ENST00000606048 486 ntBASIC1.7□□□□□ -2.14
CASQ1P31415 AL392048.1-201ENST00000613946 534 ntBASIC1.7□□□□□ -2.14
CASQ1P31415 AC013470.4-201ENST00000619978 986 ntBASIC1.7□□□□□ -2.14
CASQ1P31415 AC092881.1-201ENST00000638218 2733 ntBASIC1.7□□□□□ -2.14
CASQ1P31415 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
CASQ1P31415 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CASQ1P31415 RNU6-468P-201ENST00000384003 109 ntBASIC1.69□□□□□ -2.14
CASQ1P31415 MIR320A-201ENST00000385302 82 ntBASIC1.69□□□□□ -2.14
CASQ1P31415 RNA5SP501-201ENST00000410990 112 ntBASIC1.69□□□□□ -2.14
CASQ1P31415 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.69□□□□□ -2.14
CASQ1P31415 OR51A5P-201ENST00000415429 942 ntBASIC1.69□□□□□ -2.14
CASQ1P31415 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.69□□□□□ -2.14
CASQ1P31415 AC118469.1-201ENST00000442943 488 ntBASIC1.69□□□□□ -2.14
CASQ1P31415 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.69□□□□□ -2.14
CASQ1P31415 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.69□□□□□ -2.14
CASQ1P31415 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.69□□□□□ -2.14
CASQ1P31415 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.69□□□□□ -2.14
CASQ1P31415 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.69□□□□□ -2.14
CASQ1P31415 AC069528.1-202ENST00000482888 637 ntBASIC1.69□□□□□ -2.14
CASQ1P31415 AC092436.1-201ENST00000506450 503 ntBASIC1.69□□□□□ -2.14
CASQ1P31415 HSPE1P18-201ENST00000517602 280 ntBASIC1.69□□□□□ -2.14
CASQ1P31415 AP005660.1-201ENST00000522972 293 ntBASIC1.69□□□□□ -2.14
CASQ1P31415 AP000763.2-201ENST00000540641 163 ntBASIC1.69□□□□□ -2.14
CASQ1P31415 AL512310.1-201ENST00000548639 172 ntBASIC1.69□□□□□ -2.14
CASQ1P31415 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.69□□□□□ -2.14
CASQ1P31415 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.69□□□□□ -2.14
CASQ1P31415 AP000648.3-201ENST00000623539 4507 ntBASIC1.69□□□□□ -2.14
CASQ1P31415 ZNF680P1-201ENST00000436625 1469 ntBASIC1.69□□□□□ -2.14
CASQ1P31415 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.68□□□□□ -2.14
CASQ1P31415 SNORD14D-201ENST00000384390 87 ntBASIC1.68□□□□□ -2.14
CASQ1P31415 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.68□□□□□ -2.14
CASQ1P31415 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.68□□□□□ -2.14
CASQ1P31415 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.68□□□□□ -2.14
CASQ1P31415 HMGB1P27-201ENST00000431429 603 ntBASIC1.68□□□□□ -2.14
CASQ1P31415 AL139415.2-201ENST00000431968 163 ntBASIC1.68□□□□□ -2.14
CASQ1P31415 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.68□□□□□ -2.14
CASQ1P31415 RPL7P54-201ENST00000438336 674 ntBASIC1.68□□□□□ -2.14
CASQ1P31415 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.68□□□□□ -2.14
CASQ1P31415 BRK1P2-201ENST00000442875 223 ntBASIC1.68□□□□□ -2.14
CASQ1P31415 FAM103A2P-201ENST00000444122 354 ntBASIC1.68□□□□□ -2.14
CASQ1P31415 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.68□□□□□ -2.14
CASQ1P31415 AL353718.1-201ENST00000451028 517 ntBASIC1.68□□□□□ -2.14
CASQ1P31415 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.68□□□□□ -2.14
CASQ1P31415 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.68□□□□□ -2.14
CASQ1P31415 RNA5SP182-201ENST00000516064 82 ntBASIC1.68□□□□□ -2.14
CASQ1P31415 RNU6-1225P-201ENST00000516336 65 ntBASIC1.68□□□□□ -2.14
CASQ1P31415 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.68□□□□□ -2.14
CASQ1P31415 AC023538.1-201ENST00000534576 736 ntBASIC1.68□□□□□ -2.14
CASQ1P31415 AC074050.1-201ENST00000563247 211 ntBASIC1.68□□□□□ -2.14
CASQ1P31415 AC021171.1-201ENST00000603137 706 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms