Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC034229.5-201ENST00000624258 185 ntBASIC4.04□□□□□ -1.76
HOXC12P31275 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXC12P31275 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXC12P31275 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXC12P31275 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXC12P31275 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXC12P31275 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXC12P31275 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC12P31275 AC008669.1-201ENST00000565823 2178 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC12P31275 Z82217.1-201ENST00000625157 8149 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 AP001148.1-201ENST00000624124 2359 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
HOXC12P31275 Y_RNA.193-201ENST00000363979 102 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 SNORD14.1-201ENST00000365609 90 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC12P31275 RNU6-505P-201ENST00000384427 107 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 SNORA70C-201ENST00000384538 135 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 RNU6-658P-201ENST00000384606 106 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 Y_RNA.574-201ENST00000384766 95 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 MIR625-201ENST00000385047 85 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 EIF4EP2-201ENST00000422816 654 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 AL451050.1-201ENST00000450126 415 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 CHEK2P4-201ENST00000450340 246 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 OR2AQ1P-201ENST00000451972 200 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 AC013470.1-201ENST00000453438 462 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 AC112492.4-201ENST00000456549 352 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 RNU7-169P-201ENST00000459456 61 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 RPS4XP13-201ENST00000483219 789 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXC12P31275 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXC12P31275 RNU1-103P-201ENST00000516502 125 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 RNU7-4P-201ENST00000516961 62 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC12P31275 AP001781.1-201ENST00000530977 207 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC12P31275 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC12P31275 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC12P31275 PRR13P7-201ENST00000605538 430 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC12P31275 MIR1244-1-201ENST00000612829 85 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC12P31275 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HOXC12P31275 MIR1244-3-201ENST00000635744 85 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 MIR4272-201ENST00000635924 64 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 MIR1244-2-201ENST00000636449 85 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 MIR1244-4-202ENST00000636813 85 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC12P31275 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC12P31275 MTND5P9-201ENST00000503854 1755 ntBASIC4.03□□□□□ -1.76
HOXC12P31275 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
HOXC12P31275 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC12P31275 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC12P31275 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HOXC12P31275 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.03□□□□□ -1.77
HOXC12P31275 ZNF299P-201ENST00000406845 1804 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HOXC12P31275 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXC12P31275 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC12P31275 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC12P31275 RNU4-42P-201ENST00000364738 142 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 SET-203ENST00000372688 801 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXC12P31275 RNU6-217P-201ENST00000384164 104 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 RNU6-72P-201ENST00000384285 79 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC12P31275 RPL36AP10-201ENST00000421785 322 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC12P31275 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC12P31275 RNU6-703P-201ENST00000516946 107 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 MIR2116-201ENST00000517221 80 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 AC022616.4-201ENST00000522985 181 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 AC005476.1-201ENST00000554427 397 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 LINC00933-203ENST00000559812 219 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 CYCSP39-201ENST00000565821 309 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 AC034105.4-201ENST00000568304 277 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 MIR5696-201ENST00000578474 85 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 AC091178.1-203ENST00000584586 279 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC12P31275 MIR8069-1-201ENST00000616627 86 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 ZYXP1-201ENST00000617638 118 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 MIR8069-2-201ENST00000621412 86 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 AC007792.1-201ENST00000623023 402 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 U4.7-201ENST00000638126 106 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC12P31275 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXC12P31275 RAD17P1-201ENST00000418130 2042 ntBASIC4.02□□□□□ -1.77
HOXC12P31275 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HOXC12P31275 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC12P31275 OTUD4P1-201ENST00000237841 3067 ntBASIC4.01□□□□□ -1.77
HOXC12P31275 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC12P31275 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXC12P31275 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXC12P31275 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.01□□□□□ -1.77
HOXC12P31275 Y_RNA.152-201ENST00000363578 100 ntBASIC4.01□□□□□ -1.77
HOXC12P31275 Y_RNA.380-201ENST00000365663 111 ntBASIC4.01□□□□□ -1.77
HOXC12P31275 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HOXC12P31275 RNA5SP146-201ENST00000410743 123 ntBASIC4.01□□□□□ -1.77
HOXC12P31275 RNA5SP31-201ENST00000411144 127 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms