Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 TPTE2P4-201ENST00000258589 1605 ntBASIC0.75□□□□□ -2.29
CLIP1P30622 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.75□□□□□ -2.29
CLIP1P30622 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CLIP1P30622 MIR424-201ENST00000362227 98 ntBASIC0.74□□□□□ -2.29
CLIP1P30622 RNU6-1249P-201ENST00000363237 111 ntBASIC0.74□□□□□ -2.29
CLIP1P30622 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
CLIP1P30622 FTH1P15-201ENST00000406984 280 ntBASIC0.74□□□□□ -2.29
CLIP1P30622 RPS15AP38-201ENST00000413110 372 ntBASIC0.74□□□□□ -2.29
CLIP1P30622 RPL31P35-201ENST00000431058 377 ntBASIC0.74□□□□□ -2.29
CLIP1P30622 RPS20P10-201ENST00000451209 253 ntBASIC0.74□□□□□ -2.29
CLIP1P30622 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.74□□□□□ -2.29
CLIP1P30622 RNA5SP137-201ENST00000516833 135 ntBASIC0.74□□□□□ -2.29
CLIP1P30622 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.74□□□□□ -2.29
CLIP1P30622 OR6C7P-201ENST00000547875 934 ntBASIC0.74□□□□□ -2.29
CLIP1P30622 MIR548Y-201ENST00000582739 110 ntBASIC0.74□□□□□ -2.29
CLIP1P30622 AC083865.1-201ENST00000636634 831 ntBASIC0.74□□□□□ -2.29
CLIP1P30622 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CLIP1P30622 MT-TC-201ENST00000387405 66 ntBASIC0.73□□□□□ -2.29
CLIP1P30622 SSXP10-201ENST00000402595 565 ntBASIC0.73□□□□□ -2.29
CLIP1P30622 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.73□□□□□ -2.29
CLIP1P30622 GTF2IP20-201ENST00000431663 360 ntBASIC0.73□□□□□ -2.29
CLIP1P30622 CR769776.1-201ENST00000441254 787 ntBASIC0.73□□□□□ -2.29
CLIP1P30622 RPL9P9-202ENST00000466501 579 ntBASIC0.73□□□□□ -2.29
CLIP1P30622 MIR892C-201ENST00000516410 77 ntBASIC0.73□□□□□ -2.29
CLIP1P30622 RNU6-1308P-201ENST00000516817 103 ntBASIC0.73□□□□□ -2.29
CLIP1P30622 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.73□□□□□ -2.29
CLIP1P30622 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.73□□□□□ -2.29
CLIP1P30622 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.73□□□□□ -2.29
CLIP1P30622 AP001269.3-201ENST00000588718 329 ntBASIC0.73□□□□□ -2.29
CLIP1P30622 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC0.73□□□□□ -2.29
CLIP1P30622 AL356421.1-201ENST00000403255 413 ntBASIC0.72□□□□□ -2.29
CLIP1P30622 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.72□□□□□ -2.29
CLIP1P30622 RPL23AP35-201ENST00000451906 501 ntBASIC0.72□□□□□ -2.29
CLIP1P30622 AC098591.2-201ENST00000510152 315 ntBASIC0.72□□□□□ -2.29
CLIP1P30622 AC136932.1-201ENST00000574771 208 ntBASIC0.72□□□□□ -2.29
CLIP1P30622 U4atac.1-201ENST00000618345 95 ntBASIC0.72□□□□□ -2.29
CLIP1P30622 AC012676.2-201ENST00000619258 186 ntBASIC0.72□□□□□ -2.29
CLIP1P30622 AL512506.2-201ENST00000624472 458 ntBASIC0.72□□□□□ -2.29
CLIP1P30622 AC073544.1-201ENST00000600110 1595 ntBASIC0.72□□□□□ -2.29
CLIP1P30622 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
CLIP1P30622 RNU6-1243P-201ENST00000364028 107 ntBASIC0.72□□□□□ -2.29
CLIP1P30622 RNU6-270P-201ENST00000364131 105 ntBASIC0.72□□□□□ -2.29
CLIP1P30622 AC083875.1-201ENST00000419509 405 ntBASIC0.72□□□□□ -2.29
CLIP1P30622 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.72□□□□□ -2.29
CLIP1P30622 AC114737.2-201ENST00000421583 173 ntBASIC0.72□□□□□ -2.29
CLIP1P30622 AC092573.2-201ENST00000434546 243 ntBASIC0.72□□□□□ -2.29
CLIP1P30622 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
CLIP1P30622 AC138853.1-201ENST00000503549 823 ntBASIC0.72□□□□□ -2.29
CLIP1P30622 MED28P6-201ENST00000558776 231 ntBASIC0.72□□□□□ -2.29
CLIP1P30622 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
CLIP1P30622 RNU4-23P-201ENST00000362839 140 ntBASIC0.71□□□□□ -2.3
CLIP1P30622 RNU6-35P-201ENST00000384530 107 ntBASIC0.71□□□□□ -2.3
CLIP1P30622 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.71□□□□□ -2.3
CLIP1P30622 AL157398.1-201ENST00000452981 186 ntBASIC0.71□□□□□ -2.3
CLIP1P30622 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.71□□□□□ -2.3
CLIP1P30622 AL133370.2-201ENST00000619934 439 ntBASIC0.71□□□□□ -2.3
CLIP1P30622 AC097372.4-201ENST00000625025 466 ntBASIC0.71□□□□□ -2.3
CLIP1P30622 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.71□□□□□ -2.3
CLIP1P30622 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.71□□□□□ -2.3
CLIP1P30622 MTND4P12-201ENST00000498999 1377 ntBASIC0.71□□□□□ -2.3
CLIP1P30622 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.7□□□□□ -2.3
CLIP1P30622 RNU6-1155P-201ENST00000363554 107 ntBASIC0.7□□□□□ -2.3
CLIP1P30622 SNORA40.19-201ENST00000390846 128 ntBASIC0.7□□□□□ -2.3
CLIP1P30622 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.7□□□□□ -2.3
CLIP1P30622 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.7□□□□□ -2.3
CLIP1P30622 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.7□□□□□ -2.3
CLIP1P30622 HMGB1P35-201ENST00000503360 598 ntBASIC0.7□□□□□ -2.3
CLIP1P30622 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CLIP1P30622 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC0.7□□□□□ -2.3
CLIP1P30622 AC025857.1-201ENST00000525252 377 ntBASIC0.7□□□□□ -2.3
CLIP1P30622 AC105036.1-201ENST00000566222 271 ntBASIC0.7□□□□□ -2.3
CLIP1P30622 AL355472.4-201ENST00000610233 626 ntBASIC0.7□□□□□ -2.3
CLIP1P30622 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.7□□□□□ -2.3
CLIP1P30622 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CLIP1P30622 RNU6-989P-201ENST00000362756 107 ntBASIC0.69□□□□□ -2.3
CLIP1P30622 RNU6-1074P-201ENST00000383995 104 ntBASIC0.69□□□□□ -2.3
CLIP1P30622 RNU2-70P-201ENST00000410718 179 ntBASIC0.69□□□□□ -2.3
CLIP1P30622 AC009518.2-201ENST00000418056 731 ntBASIC0.69□□□□□ -2.3
CLIP1P30622 OFD1P18Y-201ENST00000420889 959 ntBASIC0.69□□□□□ -2.3
CLIP1P30622 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.69□□□□□ -2.3
CLIP1P30622 RNU5F-8P-201ENST00000515941 111 ntBASIC0.69□□□□□ -2.3
CLIP1P30622 SNORA70.16-201ENST00000516390 95 ntBASIC0.69□□□□□ -2.3
CLIP1P30622 RNU7-40P-201ENST00000516397 64 ntBASIC0.69□□□□□ -2.3
CLIP1P30622 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CLIP1P30622 Y_RNA.294-201ENST00000364916 102 ntBASIC0.68□□□□□ -2.3
CLIP1P30622 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.68□□□□□ -2.3
CLIP1P30622 FTH1P12-201ENST00000432137 551 ntBASIC0.68□□□□□ -2.3
CLIP1P30622 MICF-203ENST00000432679 129 ntBASIC0.68□□□□□ -2.3
CLIP1P30622 AL354941.1-201ENST00000438600 464 ntBASIC0.68□□□□□ -2.3
CLIP1P30622 ARPC3P5-201ENST00000448802 534 ntBASIC0.68□□□□□ -2.3
CLIP1P30622 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.68□□□□□ -2.3
CLIP1P30622 AC022447.1-201ENST00000515358 464 ntBASIC0.68□□□□□ -2.3
CLIP1P30622 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.68□□□□□ -2.3
CLIP1P30622 AC107953.1-201ENST00000522216 297 ntBASIC0.68□□□□□ -2.3
CLIP1P30622 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.68□□□□□ -2.3
CLIP1P30622 AC005668.1-201ENST00000571142 476 ntBASIC0.68□□□□□ -2.3
CLIP1P30622 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.68□□□□□ -2.3
CLIP1P30622 RNU6-1251P-201ENST00000364502 107 ntBASIC0.67□□□□□ -2.3
CLIP1P30622 USP9YP33-201ENST00000412220 421 ntBASIC0.67□□□□□ -2.3
CLIP1P30622 AC006548.1-201ENST00000427470 102 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms