Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.68□□□□□ -1.82
CD40P25942 AC005014.2-201ENST00000607795 599 ntBASIC3.68□□□□□ -1.82
CD40P25942 HMGB1P24-202ENST00000615653 685 ntBASIC3.68□□□□□ -1.82
CD40P25942 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CD40P25942 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CD40P25942 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CD40P25942 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CD40P25942 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CD40P25942 AF127577.6-201ENST00000623352 2191 ntBASIC3.68□□□□□ -1.82
CD40P25942 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CD40P25942 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.67□□□□□ -1.82
CD40P25942 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CD40P25942 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CD40P25942 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CD40P25942 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.67□□□□□ -1.82
CD40P25942 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.67□□□□□ -1.82
CD40P25942 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CD40P25942 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.67□□□□□ -1.82
CD40P25942 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CD40P25942 RNU6-527P-201ENST00000363425 104 ntBASIC3.67□□□□□ -1.82
CD40P25942 U3.6-201ENST00000363622 211 ntBASIC3.67□□□□□ -1.82
CD40P25942 RNU6-105P-201ENST00000363909 104 ntBASIC3.67□□□□□ -1.82
CD40P25942 RNA5SP479-201ENST00000364858 117 ntBASIC3.67□□□□□ -1.82
CD40P25942 AC117470.1-201ENST00000381974 330 ntBASIC3.67□□□□□ -1.82
CD40P25942 Y_RNA.459-201ENST00000384251 102 ntBASIC3.67□□□□□ -1.82
CD40P25942 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CD40P25942 SNORD66.1-201ENST00000391230 76 ntBASIC3.67□□□□□ -1.82
CD40P25942 MRPL42P3-201ENST00000401492 326 ntBASIC3.67□□□□□ -1.82
CD40P25942 AL591034.2-201ENST00000402839 359 ntBASIC3.67□□□□□ -1.82
CD40P25942 MIR1193-201ENST00000408109 78 ntBASIC3.67□□□□□ -1.82
CD40P25942 RNA5SP317-201ENST00000410176 116 ntBASIC3.67□□□□□ -1.82
CD40P25942 RNA5SP311-201ENST00000411290 116 ntBASIC3.67□□□□□ -1.82
CD40P25942 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.67□□□□□ -1.82
CD40P25942 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.67□□□□□ -1.82
CD40P25942 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.67□□□□□ -1.82
CD40P25942 RPL23AP82-202ENST00000427528 469 ntBASIC3.67□□□□□ -1.82
CD40P25942 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.67□□□□□ -1.82
CD40P25942 SNRPEP4-201ENST00000435815 279 ntBASIC3.67□□□□□ -1.82
CD40P25942 RPL23AP14-201ENST00000468281 468 ntBASIC3.67□□□□□ -1.82
CD40P25942 AC022795.1-201ENST00000473808 480 ntBASIC3.67□□□□□ -1.82
CD40P25942 RPL17P19-201ENST00000489069 552 ntBASIC3.67□□□□□ -1.82
CD40P25942 AC114801.2-201ENST00000503825 781 ntBASIC3.67□□□□□ -1.82
CD40P25942 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.67□□□□□ -1.82
CD40P25942 RNA5SP315-201ENST00000516340 116 ntBASIC3.67□□□□□ -1.82
CD40P25942 RNA5SP312-201ENST00000517068 116 ntBASIC3.67□□□□□ -1.82
CD40P25942 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.67□□□□□ -1.82
CD40P25942 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.67□□□□□ -1.82
CD40P25942 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.67□□□□□ -1.82
CD40P25942 AL451007.1-201ENST00000595491 289 ntBASIC3.67□□□□□ -1.82
CD40P25942 AL158827.2-201ENST00000602494 330 ntBASIC3.67□□□□□ -1.82
CD40P25942 AC136443.5-201ENST00000603741 370 ntBASIC3.67□□□□□ -1.82
CD40P25942 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.67□□□□□ -1.82
CD40P25942 MIR6134-201ENST00000617606 109 ntBASIC3.67□□□□□ -1.82
CD40P25942 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.67□□□□□ -1.82
CD40P25942 AC091925.1-201ENST00000623204 462 ntBASIC3.67□□□□□ -1.82
CD40P25942 AC097372.5-201ENST00000623665 376 ntBASIC3.67□□□□□ -1.82
CD40P25942 AL691447.3-201ENST00000635020 330 ntBASIC3.67□□□□□ -1.82
CD40P25942 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CD40P25942 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.67□□□□□ -1.82
CD40P25942 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.67□□□□□ -1.82
CD40P25942 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CD40P25942 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.67□□□□□ -1.82
CD40P25942 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CD40P25942 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CD40P25942 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CD40P25942 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.66□□□□□ -1.82
CD40P25942 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.66□□□□□ -1.82
CD40P25942 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CD40P25942 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CD40P25942 MTND5P7-201ENST00000413558 1798 ntBASIC3.66□□□□□ -1.82
CD40P25942 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.66□□□□□ -1.82
CD40P25942 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.66□□□□□ -1.82
CD40P25942 AP001486.2-201ENST00000561652 5113 ntBASIC3.66□□□□□ -1.82
CD40P25942 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CD40P25942 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
CD40P25942 RNU1-94P-201ENST00000362627 173 ntBASIC3.66□□□□□ -1.82
CD40P25942 RNU6-942P-201ENST00000363002 107 ntBASIC3.66□□□□□ -1.82
CD40P25942 RNU6-99P-201ENST00000364721 107 ntBASIC3.66□□□□□ -1.82
CD40P25942 MIR195-201ENST00000385194 87 ntBASIC3.66□□□□□ -1.82
CD40P25942 RPS29P13-201ENST00000402041 169 ntBASIC3.66□□□□□ -1.82
CD40P25942 AC108032.1-201ENST00000416706 207 ntBASIC3.66□□□□□ -1.82
CD40P25942 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.66□□□□□ -1.82
CD40P25942 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.66□□□□□ -1.82
CD40P25942 NUP35P1-201ENST00000422734 947 ntBASIC3.66□□□□□ -1.82
CD40P25942 RBMY1KP-201ENST00000423480 476 ntBASIC3.66□□□□□ -1.82
CD40P25942 RPL23AP46-201ENST00000438548 490 ntBASIC3.66□□□□□ -1.82
CD40P25942 AC006026.2-201ENST00000457376 180 ntBASIC3.66□□□□□ -1.82
CD40P25942 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.66□□□□□ -1.82
CD40P25942 RPS29P19-201ENST00000479709 171 ntBASIC3.66□□□□□ -1.82
CD40P25942 AC105758.1-201ENST00000506038 399 ntBASIC3.66□□□□□ -1.82
CD40P25942 AC010265.1-201ENST00000513509 211 ntBASIC3.66□□□□□ -1.82
CD40P25942 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CD40P25942 RPL21P7-201ENST00000557463 483 ntBASIC3.66□□□□□ -1.82
CD40P25942 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.66□□□□□ -1.82
CD40P25942 SUB1P3-201ENST00000564581 315 ntBASIC3.66□□□□□ -1.82
CD40P25942 AC010653.1-201ENST00000571108 881 ntBASIC3.66□□□□□ -1.82
CD40P25942 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.66□□□□□ -1.82
CD40P25942 MIR4680-201ENST00000580906 66 ntBASIC3.66□□□□□ -1.82
CD40P25942 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.66□□□□□ -1.82
CD40P25942 AL020997.2-201ENST00000602607 184 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms