Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LMNB1P20700 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LMNB1P20700 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
LMNB1P20700 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.78□□□□□ -1.64
LMNB1P20700 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.78□□□□□ -1.64
LMNB1P20700 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LMNB1P20700 AC011266.1-201ENST00000624119 3569 ntBASIC4.78□□□□□ -1.64
LMNB1P20700 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
LMNB1P20700 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LMNB1P20700 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
LMNB1P20700 Y_RNA.47-201ENST00000362697 108 ntBASIC4.78□□□□□ -1.64
LMNB1P20700 RNU5A-1-201ENST00000362698 116 ntBASIC4.78□□□□□ -1.64
LMNB1P20700 RNA5SP51-201ENST00000364750 119 ntBASIC4.78□□□□□ -1.64
LMNB1P20700 RNU6-55P-201ENST00000411092 107 ntBASIC4.78□□□□□ -1.64
LMNB1P20700 UBE2D3P2-201ENST00000424409 445 ntBASIC4.78□□□□□ -1.64
LMNB1P20700 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.78□□□□□ -1.64
LMNB1P20700 RPL21P11-201ENST00000461458 483 ntBASIC4.78□□□□□ -1.64
LMNB1P20700 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.78□□□□□ -1.64
LMNB1P20700 VN1R104P-201ENST00000505115 1009 ntBASIC4.78□□□□□ -1.64
LMNB1P20700 RN7SKP289-201ENST00000517244 295 ntBASIC4.78□□□□□ -1.64
LMNB1P20700 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.78□□□□□ -1.64
LMNB1P20700 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.78□□□□□ -1.64
LMNB1P20700 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.78□□□□□ -1.64
LMNB1P20700 MTND6P33-201ENST00000571794 183 ntBASIC4.78□□□□□ -1.64
LMNB1P20700 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.78□□□□□ -1.64
LMNB1P20700 7SK.7-201ENST00000603504 247 ntBASIC4.78□□□□□ -1.64
LMNB1P20700 AC123912.5-201ENST00000605470 343 ntBASIC4.78□□□□□ -1.64
LMNB1P20700 RNA5SP108-201ENST00000605921 117 ntBASIC4.78□□□□□ -1.64
LMNB1P20700 AL512643.1-201ENST00000635735 524 ntBASIC4.78□□□□□ -1.64
LMNB1P20700 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LMNB1P20700 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LMNB1P20700 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.78□□□□□ -1.64
LMNB1P20700 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LMNB1P20700 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LMNB1P20700 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
LMNB1P20700 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.65
LMNB1P20700 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.77□□□□□ -1.65
LMNB1P20700 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.77□□□□□ -1.65
LMNB1P20700 AL356489.2-201ENST00000566968 3528 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LMNB1P20700 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMNB1P20700 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LMNB1P20700 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LMNB1P20700 RNA5SP52-201ENST00000362448 134 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 Y_RNA.500-201ENST00000384466 111 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 MIR128-1-201ENST00000384921 82 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 MIR514A1-201ENST00000385133 98 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LMNB1P20700 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 AC114482.1-201ENST00000418010 247 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 AL353621.1-201ENST00000418219 243 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.77□□□□□ -1.65
LMNB1P20700 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.77□□□□□ -1.65
LMNB1P20700 AC096644.2-201ENST00000429278 159 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.77□□□□□ -1.65
LMNB1P20700 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.77□□□□□ -1.65
LMNB1P20700 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.77□□□□□ -1.65
LMNB1P20700 HMGB3P30-201ENST00000457863 606 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 AC128713.1-201ENST00000471495 306 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 RPL31P60-201ENST00000478450 367 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 AP000926.1-201ENST00000479573 241 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.77□□□□□ -1.65
LMNB1P20700 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.77□□□□□ -1.65
LMNB1P20700 AP004371.1-201ENST00000525240 214 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.77□□□□□ -1.65
LMNB1P20700 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.77□□□□□ -1.65
LMNB1P20700 AC113195.1-201ENST00000579952 141 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 AC244505.7-201ENST00000599675 272 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 AC092447.9-201ENST00000603395 144 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 AC098826.3-201ENST00000603823 466 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.77□□□□□ -1.65
LMNB1P20700 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 AC138627.2-201ENST00000624202 601 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 Z69720.2-201ENST00000624755 279 ntBASIC4.77□□□□□ -1.65
LMNB1P20700 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.77□□□□□ -1.65
LMNB1P20700 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMNB1P20700 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LMNB1P20700 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMNB1P20700 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LMNB1P20700 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
LMNB1P20700 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMNB1P20700 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
LMNB1P20700 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.76□□□□□ -1.65
LMNB1P20700 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMNB1P20700 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMNB1P20700 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.76□□□□□ -1.65
LMNB1P20700 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMNB1P20700 Y_RNA.455-201ENST00000384230 98 ntBASIC4.76□□□□□ -1.65
LMNB1P20700 MIR490-201ENST00000384865 128 ntBASIC4.76□□□□□ -1.65
LMNB1P20700 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.76□□□□□ -1.65
LMNB1P20700 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.76□□□□□ -1.65
LMNB1P20700 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.76□□□□□ -1.65
LMNB1P20700 AL731563.1-201ENST00000442202 214 ntBASIC4.76□□□□□ -1.65
LMNB1P20700 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.76□□□□□ -1.65
LMNB1P20700 HMGB1P22-201ENST00000505315 124 ntBASIC4.76□□□□□ -1.65
LMNB1P20700 SNORD116.3-201ENST00000517176 78 ntBASIC4.76□□□□□ -1.65
LMNB1P20700 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.76□□□□□ -1.65
LMNB1P20700 IGLV3-26-201ENST00000520756 302 ntBASIC4.76□□□□□ -1.65
LMNB1P20700 AC110588.1-201ENST00000559699 137 ntBASIC4.76□□□□□ -1.65
LMNB1P20700 AC004817.2-201ENST00000561794 651 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms