Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DPA1P20036 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.54□□□□□ -2
HLA-DPA1P20036 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HLA-DPA1P20036 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.54□□□□□ -2
HLA-DPA1P20036 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DPA1P20036 SNORD56.2-201ENST00000363242 71 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 RNU6-166P-201ENST00000384371 107 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 MRPL42P2-201ENST00000403169 426 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 Y_RNA.608-201ENST00000410647 95 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 AC011233.1-201ENST00000422812 283 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 AC010099.3-201ENST00000423896 409 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 EIF4EP4-201ENST00000424916 578 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 AC137499.1-201ENST00000427602 88 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 RPL23AP30-201ENST00000432419 501 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DPA1P20036 UBE2D3P1-201ENST00000436669 444 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 RPS12P2-201ENST00000439728 269 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 MTND5P2-201ENST00000442927 1142 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 AL591719.1-201ENST00000444669 744 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 RPL7P12-201ENST00000446719 750 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DPA1P20036 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DPA1P20036 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DPA1P20036 MRPS33P3-201ENST00000513456 322 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 HMGB1P41-201ENST00000520234 440 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 AP000889.1-201ENST00000530968 660 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DPA1P20036 AC060766.3-201ENST00000591442 263 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 AC245884.12-201ENST00000615364 59 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 AC027807.2-201ENST00000616099 408 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 MIR7844-201ENST00000616161 122 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DPA1P20036 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HLA-DPA1P20036 Z82209.1-201ENST00000422141 2135 ntBASIC2.54□□□□□ -2
HLA-DPA1P20036 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DPA1P20036 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DPA1P20036 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.54□□□□□ -2
HLA-DPA1P20036 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HLA-DPA1P20036 ZNF271P-202ENST00000465539 1970 ntBASIC2.53□□□□□ -2
HLA-DPA1P20036 AC073343.1-201ENST00000328239 651 ntBASIC2.53□□□□□ -2
HLA-DPA1P20036 RNA5SP456-201ENST00000364002 114 ntBASIC2.53□□□□□ -2
HLA-DPA1P20036 RNU6-395P-201ENST00000365662 106 ntBASIC2.53□□□□□ -2
HLA-DPA1P20036 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DPA1P20036 MIR518D-201ENST00000385014 87 ntBASIC2.53□□□□□ -2
HLA-DPA1P20036 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
HLA-DPA1P20036 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DPA1P20036 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DPA1P20036 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DPA1P20036 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DPA1P20036 AC003071.1-201ENST00000451219 789 ntBASIC2.53□□□□□ -2
HLA-DPA1P20036 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DPA1P20036 ZNF114P1-201ENST00000453500 292 ntBASIC2.53□□□□□ -2
HLA-DPA1P20036 AC010587.1-201ENST00000505809 469 ntBASIC2.53□□□□□ -2
HLA-DPA1P20036 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
HLA-DPA1P20036 AP003181.2-201ENST00000528941 181 ntBASIC2.53□□□□□ -2
HLA-DPA1P20036 AP003122.4-201ENST00000530980 758 ntBASIC2.53□□□□□ -2
HLA-DPA1P20036 CBX3P7-201ENST00000532876 502 ntBASIC2.53□□□□□ -2
HLA-DPA1P20036 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DPA1P20036 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DPA1P20036 AP002360.4-201ENST00000606980 481 ntBASIC2.53□□□□□ -2
HLA-DPA1P20036 AL031775.1-201ENST00000607014 887 ntBASIC2.53□□□□□ -2
HLA-DPA1P20036 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DPA1P20036 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.53□□□□□ -2
HLA-DPA1P20036 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2.01
HLA-DPA1P20036 SNORA3A-201ENST00000364113 130 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 AL133475.1-201ENST00000404414 305 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 RNU4-72P-201ENST00000410754 173 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 AC009518.2-201ENST00000418056 731 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DPA1P20036 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DPA1P20036 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DPA1P20036 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DPA1P20036 AC009961.3-201ENST00000449832 765 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 AC112771.1-201ENST00000463581 102 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DPA1P20036 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DPA1P20036 MRPL42P6-201ENST00000486397 371 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DPA1P20036 MTND4P2-201ENST00000507767 1203 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 AF213884.2-201ENST00000510417 903 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 AC118465.1-201ENST00000513820 1271 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 RN7SKP24-201ENST00000515888 284 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DPA1P20036 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DPA1P20036 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DPA1P20036 AL670379.10-201ENST00000604330 253 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 AL049779.4-201ENST00000604500 156 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 AL670379.9-201ENST00000605428 253 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 AC092140.2-201ENST00000618027 521 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 U4.3-201ENST00000621047 82 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 AC010297.1-201ENST00000623948 149 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 AC138627.2-201ENST00000624202 601 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DPA1P20036 HSPA8P4-201ENST00000511877 1920 ntBASIC2.52□□□□□ -2.01
HLA-DPA1P20036 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DPA1P20036 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DPA1P20036 AL162578.1-201ENST00000406202 378 ntBASIC2.51□□□□□ -2.01
HLA-DPA1P20036 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DPA1P20036 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DPA1P20036 NPM1P11-201ENST00000417106 855 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms