| TFE3 | P19532 | AC092650.1-201 | ENST00000447571 | 1808 nt | TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | RNU1-108P-201 | ENST00000362556 | 161 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | SNORA51.11-201 | ENST00000384442 | 131 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | RNU6-1197P-201 | ENST00000391183 | 107 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | RPL23AP26-201 | ENST00000412728 | 464 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AL356968.1-201 | ENST00000416622 | 474 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AC010745.2-201 | ENST00000420404 | 839 nt | TSL 3 BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AC092047.1-201 | ENST00000424997 | 240 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | MTND3P9-201 | ENST00000429526 | 346 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | PCNPP5-201 | ENST00000452246 | 481 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | RPL23AP81-201 | ENST00000455252 | 467 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | RN7SKP210-201 | ENST00000459176 | 261 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | RPS26P28-201 | ENST00000470806 | 348 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AC091167.1-201 | ENST00000492017 | 396 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | RPL30P5-201 | ENST00000494923 | 336 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AC109927.1-202 | ENST00000511951 | 282 nt | TSL 3 BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | GYPA-208 | ENST00000512064 | 441 nt | TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | RNA5SP73-201 | ENST00000516744 | 108 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | SNORA40.15-201 | ENST00000516884 | 107 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | IGHV3-76-201 | ENST00000522465 | 295 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | PWRN1-209 | ENST00000568019 | 359 nt | TSL 3 BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | MIR4284-201 | ENST00000578924 | 81 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AL390123.1-201 | ENST00000603216 | 237 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | ARF4P1-201 | ENST00000605447 | 541 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | SMAD5-AS1_4.1-201 | ENST00000615561 | 167 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | CCL14-203 | ENST00000620991 | 426 nt | TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | U4.7-201 | ENST00000638126 | 106 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | GYPB-216 | ENST00000638448 | 363 nt | APPRIS P1 TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | VEZT-201 | ENST00000261219 | 3435 nt | TSL 5 BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | PPP1R9A-202 | ENST00000340694 | 9689 nt | APPRIS P1 TSL 5 BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | G2E3-201 | ENST00000206595 | 5804 nt | APPRIS P1 TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | PLCB1-233 | ENST00000637919 | 5074 nt | TSL 5 BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | GPR180-201 | ENST00000376958 | 8822 nt | APPRIS P1 TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | FGD4-213 | ENST00000546442 | 3503 nt | TSL 5 BASIC | 4.42 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AC000123.3-201 | ENST00000624029 | 4975 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | OTOGL-202 | ENST00000458043 | 8083 nt | APPRIS P5 TSL 5 BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | CD80-201 | ENST00000264246 | 2725 nt | APPRIS P1 TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | CEP192-201 | ENST00000325971 | 7764 nt | TSL 5 BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | MS4A14-201 | ENST00000300187 | 2997 nt | APPRIS P3 TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | RNU6-428P-201 | ENST00000362942 | 107 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | Y_RNA.307-201 | ENST00000365022 | 117 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | DEFB109C-201 | ENST00000382575 | 264 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | DEFB109B-201 | ENST00000382656 | 264 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | RNU6-140P-201 | ENST00000384566 | 108 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | RPS29P13-201 | ENST00000402041 | 169 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | RN7SKP58-201 | ENST00000411010 | 305 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | RPL17P36-201 | ENST00000420302 | 549 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | RBMY1KP-201 | ENST00000423480 | 476 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AC008080.3-201 | ENST00000440074 | 380 nt | TSL 3 BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AC006026.2-201 | ENST00000457376 | 180 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AC109327.1-201 | ENST00000471666 | 403 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AF213884.1-201 | ENST00000488102 | 463 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AC104564.1-201 | ENST00000493028 | 407 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | LINC02017-201 | ENST00000496829 | 474 nt | TSL 3 BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AC004052.1-202 | ENST00000505680 | 516 nt | TSL 3 BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | RNU6-408P-201 | ENST00000515910 | 100 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | SNORA25.11-201 | ENST00000515935 | 105 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | RNU2-53P-201 | ENST00000516257 | 147 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | RNA5SP360-201 | ENST00000516555 | 118 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AL590705.4-201 | ENST00000532209 | 134 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | LINC00944-201 | ENST00000536517 | 421 nt | TSL 2 BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | DAZAP2-209 | ENST00000549732 | 601 nt | TSL 2 BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | TVP23BP1-201 | ENST00000557500 | 617 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AC023575.1-201 | ENST00000580510 | 358 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AC064801.1-201 | ENST00000612025 | 407 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AC083809.1-201 | ENST00000615051 | 472 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AL445567.2-201 | ENST00000618935 | 498 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | NCBP1-205 | ENST00000629069 | 249 nt | TSL 5 BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AC243829.7-201 | ENST00000633081 | 225 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | DGKI-204 | ENST00000453654 | 12928 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | SLC2A2-201 | ENST00000314251 | 3210 nt | APPRIS P1 TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | ABI3BP-201 | ENST00000284322 | 4498 nt | APPRIS P2 TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | WAC-221 | ENST00000628285 | 2740 nt | TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | OR6C2-203 | ENST00000641516 | 1682 nt | APPRIS P1 BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | AC032011.1-201 | ENST00000611703 | 1549 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | STON1-GTF2A1L-201 | ENST00000394751 | 3534 nt | TSL 2 BASIC | 4.41 | □□□□□ -1.7 | | |
| TFE3 | P19532 | UNC13C-201 | ENST00000260323 | 12946 nt | APPRIS P1 TSL 5 BASIC | 4.4 | □□□□□ -1.7 | | |
| TFE3 | P19532 | TOX-201 | ENST00000361421 | 4131 nt | APPRIS P1 TSL 1 (best) BASIC | 4.4 | □□□□□ -1.7 | | |
| TFE3 | P19532 | OR56A5-201 | ENST00000340110 | 738 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | RNU6-50P-201 | ENST00000362356 | 103 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | SNORD50.1-201 | ENST00000362987 | 71 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | RNU6-379P-201 | ENST00000363813 | 104 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | Y_RNA.396-201 | ENST00000383949 | 103 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | RNU6-72P-201 | ENST00000384285 | 79 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | RNU6-784P-201 | ENST00000384330 | 106 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | MIR1302-6-201 | ENST00000408466 | 90 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | VDAC1P3-201 | ENST00000434069 | 851 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | HIGD1AP2-201 | ENST00000446367 | 280 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | FCF1P4-201 | ENST00000448326 | 183 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | AP000873.1-201 | ENST00000463987 | 400 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | RPS29P19-201 | ENST00000479709 | 171 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | AC105137.1-201 | ENST00000484355 | 562 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | AL132838.2-201 | ENST00000492041 | 314 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | OR51K1P-201 | ENST00000510214 | 950 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | PPBPP1-201 | ENST00000510807 | 373 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | RNU6-1282P-201 | ENST00000516735 | 96 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | AC100807.1-201 | ENST00000517640 | 552 nt | TSL 5 BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | OR5D17P-201 | ENST00000531492 | 978 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | OR56A5-202 | ENST00000532411 | 942 nt | APPRIS P1 BASIC | 4.4 | □□□□□ -1.71 | | |
| TFE3 | P19532 | AC092747.1-201 | ENST00000538920 | 351 nt | TSL 5 BASIC | 4.4 | □□□□□ -1.71 | | |