Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 Y_RNA.27-201ENST00000362540 103 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 RNY1-201ENST00000364228 113 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 SNORA73.2-201ENST00000364946 201 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 Y_RNA.352-201ENST00000365439 102 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 RNU6-827P-201ENST00000365553 106 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 RNU6-837P-201ENST00000391056 108 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 MTCO2P33-201ENST00000402100 465 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPRAP18433 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPRAP18433 AL591623.2-201ENST00000449978 222 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 AL445433.1-201ENST00000457507 257 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 RPL23AP65-201ENST00000475608 468 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPRAP18433 RNU6-143P-201ENST00000516942 93 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 Y_RNA.713-201ENST00000517013 96 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 AC007458.1-201ENST00000542812 373 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPRAP18433 MIR5684-201ENST00000585074 65 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 AC006272.2-201ENST00000594725 163 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 MIR6868-201ENST00000611215 58 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPRAP18433 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PTPRAP18433 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPRAP18433 MAPK10-303ENST00000641324 3959 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPRAP18433 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPRAP18433 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
PTPRAP18433 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
PTPRAP18433 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PTPRAP18433 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTPRAP18433 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPRAP18433 HSPA8P1-201ENST00000425843 1833 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 DDX18P3-201ENST00000404856 2007 ntBASIC4.79□□□□□ -1.64
PTPRAP18433 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PTPRAP18433 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPRAP18433 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPRAP18433 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PTPRAP18433 AP001148.1-201ENST00000624124 2359 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 Y_RNA.33-201ENST00000362591 102 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 Y_RNA.277-201ENST00000364754 102 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 RNU6-384P-201ENST00000364900 104 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 RNU6-395P-201ENST00000365662 106 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 RNU6-886P-201ENST00000384319 105 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 MIR153-1-201ENST00000384914 90 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 MIR301A-201ENST00000385261 86 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 RNA5SP372-201ENST00000390836 115 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 SNORD58.1-201ENST00000391313 66 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 AL513331.1-201ENST00000411908 397 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 SNORD56-201ENST00000413522 71 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.78□□□□□ -1.64
PTPRAP18433 U8.21-201ENST00000459536 136 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 RPL30P10-201ENST00000488148 337 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 AC010469.2-201ENST00000496412 480 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 SNORA31.6-201ENST00000516241 130 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 RNU4-71P-201ENST00000516258 113 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPRAP18433 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPRAP18433 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPRAP18433 AC098826.3-201ENST00000603823 466 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 MIR8076-201ENST00000611401 83 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 AC005086.4-201ENST00000623065 213 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPRAP18433 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPRAP18433 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPRAP18433 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPRAP18433 AC009812.4-201ENST00000569134 1805 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPRAP18433 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
PTPRAP18433 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPRAP18433 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPRAP18433 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPRAP18433 AL049555.1-201ENST00000562834 1933 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
PTPRAP18433 MAPK10-320ENST00000641462 6696 ntBASIC4.78□□□□□ -1.64
PTPRAP18433 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
PTPRAP18433 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PTPRAP18433 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTPRAP18433 NCAPGP1-201ENST00000505112 1814 ntBASIC4.77□□□□□ -1.65
PTPRAP18433 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
PTPRAP18433 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PTPRAP18433 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PTPRAP18433 SNORA60-201ENST00000362396 134 ntBASIC4.77□□□□□ -1.65
PTPRAP18433 RNA5SP387-201ENST00000364226 106 ntBASIC4.77□□□□□ -1.65
PTPRAP18433 RNU6-746P-201ENST00000384112 109 ntBASIC4.77□□□□□ -1.65
PTPRAP18433 AL592148.1-201ENST00000413568 445 ntBASIC4.77□□□□□ -1.65
PTPRAP18433 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.77□□□□□ -1.65
PTPRAP18433 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.77□□□□□ -1.65
PTPRAP18433 AC087588.1-201ENST00000462203 316 ntBASIC4.77□□□□□ -1.65
PTPRAP18433 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.77□□□□□ -1.65
PTPRAP18433 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.77□□□□□ -1.65
PTPRAP18433 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.77□□□□□ -1.65
PTPRAP18433 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PTPRAP18433 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.77□□□□□ -1.65
PTPRAP18433 HMGB1P14-201ENST00000557424 591 ntBASIC4.77□□□□□ -1.65
PTPRAP18433 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.77□□□□□ -1.65
PTPRAP18433 SNORA51-201ENST00000606420 132 ntBASIC4.77□□□□□ -1.65
PTPRAP18433 AC107294.1-201ENST00000609524 467 ntBASIC4.77□□□□□ -1.65
PTPRAP18433 AC004852.3-201ENST00000614131 326 ntBASIC4.77□□□□□ -1.65
PTPRAP18433 MIR376A1-201ENST00000616574 68 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms