Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC109446.1-201ENST00000566172 220 ntBASIC4.04□□□□□ -1.76
COL6A2P12110 AC123912.5-201ENST00000605470 343 ntBASIC4.04□□□□□ -1.76
COL6A2P12110 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.04□□□□□ -1.76
COL6A2P12110 AC138305.3-201ENST00000624988 240 ntBASIC4.04□□□□□ -1.76
COL6A2P12110 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.04□□□□□ -1.76
COL6A2P12110 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.04□□□□□ -1.76
COL6A2P12110 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL6A2P12110 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL6A2P12110 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL6A2P12110 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.03□□□□□ -1.76
COL6A2P12110 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL6A2P12110 AC005592.1-201ENST00000566527 1640 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.03□□□□□ -1.76
COL6A2P12110 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL6A2P12110 AC008568.2-201ENST00000623862 2313 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL6A2P12110 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL6A2P12110 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.03□□□□□ -1.76
COL6A2P12110 SNORA60-201ENST00000362396 134 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 Y_RNA.452-201ENST00000384202 108 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 Y_RNA.645-201ENST00000391229 102 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 AL022722.2-201ENST00000402519 180 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 AC096664.2-201ENST00000411843 406 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.03□□□□□ -1.76
COL6A2P12110 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.03□□□□□ -1.76
COL6A2P12110 AL590383.1-201ENST00000428602 75 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.03□□□□□ -1.76
COL6A2P12110 AL358472.1-201ENST00000431295 329 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 RPL23AP50-201ENST00000434149 455 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.03□□□□□ -1.76
COL6A2P12110 HMGN2P7-201ENST00000456186 273 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 CEACAMP4-201ENST00000457676 421 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 RNU6-1037P-201ENST00000459571 107 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 AF213884.1-201ENST00000488102 463 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 RNA5SP290-201ENST00000517133 127 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL6A2P12110 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.03□□□□□ -1.76
COL6A2P12110 TRAV32-201ENST00000553993 340 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 AC092447.9-201ENST00000603395 144 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 AL645944.1-201ENST00000603857 493 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 AC104695.3-201ENST00000604052 296 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 AC083809.1-201ENST00000615051 472 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 AC048347.1-201ENST00000624621 427 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 Z69720.2-201ENST00000624755 279 ntBASIC4.03□□□□□ -1.76
COL6A2P12110 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.03□□□□□ -1.76
COL6A2P12110 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.03□□□□□ -1.76
COL6A2P12110 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
COL6A2P12110 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL6A2P12110 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL6A2P12110 Z82217.1-201ENST00000625157 8149 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.02□□□□□ -1.77
COL6A2P12110 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
COL6A2P12110 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL6A2P12110 RNU1-132P-201ENST00000364300 164 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 Y_RNA.455-201ENST00000384230 98 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 Y_RNA.557-201ENST00000384680 107 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 RNU2-37P-201ENST00000410695 177 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 Y_RNA.623-201ENST00000411128 95 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 RNU6-325P-201ENST00000411132 105 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 ELOCP19-201ENST00000411919 318 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.02□□□□□ -1.77
COL6A2P12110 AC093151.1-201ENST00000427711 313 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 AL158071.1-201ENST00000430315 461 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 AL627311.1-201ENST00000431514 115 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 HMGB1P12-201ENST00000438594 598 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 RPS23P7-201ENST00000466210 444 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.02□□□□□ -1.77
COL6A2P12110 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.02□□□□□ -1.77
COL6A2P12110 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.02□□□□□ -1.77
COL6A2P12110 RNU6-1073P-201ENST00000517182 106 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 Y_RNA.721-201ENST00000517207 102 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 RNA5SP291-201ENST00000517222 105 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 PARP1P2-201ENST00000556806 195 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 TRAV28-201ENST00000557548 323 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.02□□□□□ -1.77
COL6A2P12110 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.02□□□□□ -1.77
COL6A2P12110 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.02□□□□□ -1.77
COL6A2P12110 MIR4277-201ENST00000578298 84 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 MIR5096-201ENST00000583713 70 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 MIR3149-201ENST00000584629 83 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 AL020997.2-201ENST00000602607 184 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 AL121917.1-203ENST00000605534 577 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 AC005014.2-201ENST00000607795 599 ntBASIC4.02□□□□□ -1.77
COL6A2P12110 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.02□□□□□ -1.77
COL6A2P12110 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.02□□□□□ -1.77
COL6A2P12110 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL6A2P12110 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.02□□□□□ -1.77
COL6A2P12110 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
COL6A2P12110 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.02□□□□□ -1.77
COL6A2P12110 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.01□□□□□ -1.77
COL6A2P12110 UBE3AP2-201ENST00000429033 2259 ntBASIC4.01□□□□□ -1.77
COL6A2P12110 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
COL6A2P12110 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL6A2P12110 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL6A2P12110 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.01□□□□□ -1.77
COL6A2P12110 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.01□□□□□ -1.77
COL6A2P12110 Y_RNA.149-201ENST00000363558 117 ntBASIC4.01□□□□□ -1.77
COL6A2P12110 RNA5SP447-201ENST00000363749 119 ntBASIC4.01□□□□□ -1.77
COL6A2P12110 SNORD14B-201ENST00000364533 90 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms