Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 AL133383.2-201ENST00000622958 2336 ntBASIC5□□□□□ -1.61
NEFMP07197 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC5□□□□□ -1.61
NEFMP07197 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5□□□□□ -1.61
NEFMP07197 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NEFMP07197 Y_RNA.389-201ENST00000383924 113 ntBASIC5□□□□□ -1.61
NEFMP07197 PTMAP2-201ENST00000397627 327 ntBASIC5□□□□□ -1.61
NEFMP07197 AL603908.1-201ENST00000406098 201 ntBASIC5□□□□□ -1.61
NEFMP07197 UBE2FP1-201ENST00000416536 447 ntBASIC5□□□□□ -1.61
NEFMP07197 USMG5P1-201ENST00000425964 177 ntBASIC5□□□□□ -1.61
NEFMP07197 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5□□□□□ -1.61
NEFMP07197 AL500522.2-201ENST00000448562 343 ntBASIC5□□□□□ -1.61
NEFMP07197 AL583843.1-201ENST00000456070 346 ntBASIC5□□□□□ -1.61
NEFMP07197 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5□□□□□ -1.61
NEFMP07197 AL133162.1-201ENST00000463228 453 ntBASIC5□□□□□ -1.61
NEFMP07197 AC104472.2-201ENST00000469035 601 ntBASIC5□□□□□ -1.61
NEFMP07197 MTCO3P44-201ENST00000510977 541 ntBASIC5□□□□□ -1.61
NEFMP07197 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5□□□□□ -1.61
NEFMP07197 RNU6-475P-201ENST00000516073 104 ntBASIC5□□□□□ -1.61
NEFMP07197 RNU6-1332P-201ENST00000516666 104 ntBASIC5□□□□□ -1.61
NEFMP07197 SCARNA14-201ENST00000516903 136 ntBASIC5□□□□□ -1.61
NEFMP07197 STX3-204ENST00000530221 534 ntTSL 5 BASIC5□□□□□ -1.61
NEFMP07197 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5□□□□□ -1.61
NEFMP07197 AC090877.1-201ENST00000561418 344 ntBASIC5□□□□□ -1.61
NEFMP07197 AC104695.3-201ENST00000604052 296 ntBASIC5□□□□□ -1.61
NEFMP07197 AL137849.1-201ENST00000604767 169 ntBASIC5□□□□□ -1.61
NEFMP07197 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5□□□□□ -1.61
NEFMP07197 HMGB1P24-202ENST00000615653 685 ntBASIC5□□□□□ -1.61
NEFMP07197 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5□□□□□ -1.61
NEFMP07197 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NEFMP07197 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5□□□□□ -1.61
NEFMP07197 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5□□□□□ -1.61
NEFMP07197 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
NEFMP07197 AL021368.2-201ENST00000606125 5352 ntBASIC4.99□□□□□ -1.61
NEFMP07197 RNU6-238P-201ENST00000363313 106 ntBASIC4.99□□□□□ -1.61
NEFMP07197 RNU6-379P-201ENST00000363813 104 ntBASIC4.99□□□□□ -1.61
NEFMP07197 SMIM11P1-201ENST00000369586 178 ntBASIC4.99□□□□□ -1.61
NEFMP07197 RNU6-339P-201ENST00000384310 107 ntBASIC4.99□□□□□ -1.61
NEFMP07197 RNU4-70P-201ENST00000384579 139 ntBASIC4.99□□□□□ -1.61
NEFMP07197 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
NEFMP07197 AC080125.1-201ENST00000414888 684 ntBASIC4.99□□□□□ -1.61
NEFMP07197 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.99□□□□□ -1.61
NEFMP07197 HMGN2P21-201ENST00000447764 270 ntBASIC4.99□□□□□ -1.61
NEFMP07197 FABP5P13-201ENST00000452144 328 ntBASIC4.99□□□□□ -1.61
NEFMP07197 AC008481.1-201ENST00000463278 396 ntBASIC4.99□□□□□ -1.61
NEFMP07197 UBE2CP3-201ENST00000502715 450 ntBASIC4.99□□□□□ -1.61
NEFMP07197 Y_RNA.668-201ENST00000516233 93 ntBASIC4.99□□□□□ -1.61
NEFMP07197 AC087854.1-201ENST00000519706 414 ntBASIC4.99□□□□□ -1.61
NEFMP07197 CYCSP27-201ENST00000527643 293 ntBASIC4.99□□□□□ -1.61
NEFMP07197 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.99□□□□□ -1.61
NEFMP07197 AC006329.2-201ENST00000611491 394 ntBASIC4.99□□□□□ -1.61
NEFMP07197 CR392039.5-201ENST00000623201 510 ntBASIC4.99□□□□□ -1.61
NEFMP07197 U6.98-201ENST00000637157 84 ntBASIC4.99□□□□□ -1.61
NEFMP07197 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NEFMP07197 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
NEFMP07197 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
NEFMP07197 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NEFMP07197 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.98□□□□□ -1.61
NEFMP07197 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.98□□□□□ -1.61
NEFMP07197 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NEFMP07197 Y_RNA.489-201ENST00000384410 101 ntBASIC4.98□□□□□ -1.61
NEFMP07197 Y_RNA.493-201ENST00000384422 102 ntBASIC4.98□□□□□ -1.61
NEFMP07197 MIR200C-201ENST00000384980 68 ntBASIC4.98□□□□□ -1.61
NEFMP07197 RNA5SP424-201ENST00000390988 115 ntBASIC4.98□□□□□ -1.61
NEFMP07197 Y_RNA.645-201ENST00000391229 102 ntBASIC4.98□□□□□ -1.61
NEFMP07197 RNU6-101P-201ENST00000410323 104 ntBASIC4.98□□□□□ -1.61
NEFMP07197 RNU6-293P-201ENST00000411259 106 ntBASIC4.98□□□□□ -1.61
NEFMP07197 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NEFMP07197 Z99755.1-201ENST00000414048 380 ntBASIC4.98□□□□□ -1.61
NEFMP07197 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.98□□□□□ -1.61
NEFMP07197 RPL21P109-201ENST00000422213 475 ntBASIC4.98□□□□□ -1.61
NEFMP07197 RPL7P37-201ENST00000425095 738 ntBASIC4.98□□□□□ -1.61
NEFMP07197 AL591212.2-201ENST00000433923 257 ntBASIC4.98□□□□□ -1.61
NEFMP07197 HIGD1AP11-201ENST00000438361 280 ntBASIC4.98□□□□□ -1.61
NEFMP07197 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.98□□□□□ -1.61
NEFMP07197 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.98□□□□□ -1.61
NEFMP07197 AL133547.1-201ENST00000448546 220 ntBASIC4.98□□□□□ -1.61
NEFMP07197 AC234775.1-201ENST00000454247 670 ntBASIC4.98□□□□□ -1.61
NEFMP07197 SNORD5.1-201ENST00000458800 75 ntBASIC4.98□□□□□ -1.61
NEFMP07197 AC084198.1-201ENST00000477747 402 ntBASIC4.98□□□□□ -1.61
NEFMP07197 AC104564.1-201ENST00000493028 407 ntBASIC4.98□□□□□ -1.61
NEFMP07197 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.98□□□□□ -1.61
NEFMP07197 RNU2-69P-201ENST00000516061 100 ntBASIC4.98□□□□□ -1.61
NEFMP07197 RN7SKP277-201ENST00000516895 283 ntBASIC4.98□□□□□ -1.61
NEFMP07197 AC103783.1-201ENST00000520506 373 ntBASIC4.98□□□□□ -1.61
NEFMP07197 RNU6-323P-201ENST00000521915 107 ntBASIC4.98□□□□□ -1.61
NEFMP07197 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.98□□□□□ -1.61
NEFMP07197 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.98□□□□□ -1.61
NEFMP07197 AC005899.2-201ENST00000584353 90 ntBASIC4.98□□□□□ -1.61
NEFMP07197 AC018889.1-201ENST00000605372 397 ntBASIC4.98□□□□□ -1.61
NEFMP07197 AL391261.4-201ENST00000616012 481 ntBASIC4.98□□□□□ -1.61
NEFMP07197 AC110801.1-201ENST00000623590 212 ntBASIC4.98□□□□□ -1.61
NEFMP07197 AL161912.2-201ENST00000565707 3007 ntBASIC4.98□□□□□ -1.61
NEFMP07197 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.98□□□□□ -1.61
NEFMP07197 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.98□□□□□ -1.61
NEFMP07197 DDX10P1-201ENST00000448545 1933 ntBASIC4.97□□□□□ -1.61
NEFMP07197 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
NEFMP07197 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NEFMP07197 SNORD62.1-201ENST00000362541 86 ntBASIC4.97□□□□□ -1.61
NEFMP07197 Y_RNA.257-201ENST00000364596 102 ntBASIC4.97□□□□□ -1.61
NEFMP07197 SNORA70E-201ENST00000384492 135 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms