Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.59□□□□□ -2.15
CPSF4O95639 AP000403.1-201ENST00000603349 851 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 AC009318.2-201ENST00000610917 651 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 MIR8081-201ENST00000611533 95 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CPSF4O95639 AC245884.12-201ENST00000615364 59 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 AL449363.1-201ENST00000617815 186 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 AL031601.2-202ENST00000622650 282 ntBASIC1.59□□□□□ -2.15
CPSF4O95639 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.59□□□□□ -2.16
CPSF4O95639 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.16
CPSF4O95639 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.58□□□□□ -2.16
CPSF4O95639 AC009487.4-201ENST00000624969 3585 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 RNU5A-8P-201ENST00000364102 114 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 RNU6-512P-201ENST00000364438 103 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.58□□□□□ -2.16
CPSF4O95639 RNU6-1200P-201ENST00000384162 107 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 RNU6-278P-201ENST00000390945 109 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.58□□□□□ -2.16
CPSF4O95639 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 RNU6-1328P-201ENST00000410938 106 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 NDUFS5P4-201ENST00000412983 318 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.58□□□□□ -2.16
CPSF4O95639 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.58□□□□□ -2.16
CPSF4O95639 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.58□□□□□ -2.16
CPSF4O95639 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 MED14P1-201ENST00000430517 648 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.58□□□□□ -2.16
CPSF4O95639 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.58□□□□□ -2.16
CPSF4O95639 Z80107.1-201ENST00000436830 412 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 AL136380.1-201ENST00000447970 162 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.58□□□□□ -2.16
CPSF4O95639 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.58□□□□□ -2.16
CPSF4O95639 AC104564.1-201ENST00000493028 407 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 RPF2P2-201ENST00000504693 896 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 AC034244.1-201ENST00000507687 207 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.58□□□□□ -2.16
CPSF4O95639 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.58□□□□□ -2.16
CPSF4O95639 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.58□□□□□ -2.16
CPSF4O95639 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.58□□□□□ -2.16
CPSF4O95639 MTATP6P15-201ENST00000527233 835 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 AC023824.2-201ENST00000566185 400 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 AC090897.2-201ENST00000581715 130 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 MIR4307-201ENST00000582802 84 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.58□□□□□ -2.16
CPSF4O95639 RPS15AP11-201ENST00000594193 385 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 AC105148.1-201ENST00000604961 409 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 AL391813.2-201ENST00000609113 322 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.58□□□□□ -2.16
CPSF4O95639 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.58□□□□□ -2.16
CPSF4O95639 AC005332.10-201ENST00000612725 619 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 AC009090.3-201ENST00000616553 565 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 AC021755.4-201ENST00000616620 456 ntBASIC1.58□□□□□ -2.16
CPSF4O95639 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.58□□□□□ -2.16
CPSF4O95639 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CPSF4O95639 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.57□□□□□ -2.16
CPSF4O95639 AC110491.1-201ENST00000562191 2010 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.57□□□□□ -2.16
CPSF4O95639 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CPSF4O95639 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
CPSF4O95639 UBE2L2-201ENST00000254302 429 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 AL391994.1-201ENST00000254724 282 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 SNORD113-6-201ENST00000363345 75 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
CPSF4O95639 SNORA70B-201ENST00000384210 135 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 RPL17P50-201ENST00000396131 546 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 NDUFS5P1-201ENST00000405668 289 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 AL355497.1-201ENST00000406262 551 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 RNU2-68P-201ENST00000410878 191 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.57□□□□□ -2.16
CPSF4O95639 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.57□□□□□ -2.16
CPSF4O95639 ISCA1P1-201ENST00000426679 387 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CPSF4O95639 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.57□□□□□ -2.16
CPSF4O95639 GPM6BP2-201ENST00000432046 144 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.57□□□□□ -2.16
CPSF4O95639 AC098831.1-201ENST00000440661 216 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 GPM6BP1-201ENST00000446387 144 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.57□□□□□ -2.16
CPSF4O95639 FABP5P15-201ENST00000453566 214 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.57□□□□□ -2.16
CPSF4O95639 AC108059.3-201ENST00000456388 214 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 MTCO1P42-201ENST00000457379 726 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.57□□□□□ -2.16
CPSF4O95639 RNU5F-8P-201ENST00000515941 111 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 SNORA31.3-201ENST00000516029 96 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 SCARNA11.3-201ENST00000517276 130 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.57□□□□□ -2.16
CPSF4O95639 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.57□□□□□ -2.16
CPSF4O95639 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.57□□□□□ -2.16
CPSF4O95639 AL356432.3-201ENST00000568952 465 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 AL354943.1-201ENST00000572103 781 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.57□□□□□ -2.16
CPSF4O95639 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
CPSF4O95639 MIR4999-201ENST00000585029 91 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.57□□□□□ -2.16
CPSF4O95639 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.57□□□□□ -2.16
CPSF4O95639 SNORD14A-201ENST00000606526 91 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 AC107214.2-201ENST00000608204 634 ntBASIC1.57□□□□□ -2.16
CPSF4O95639 AC027449.1-201ENST00000608890 407 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms