Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TMEM167AP1-201ENST00000423409 219 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 BX276092.3-201ENST00000424182 230 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 HMGB1P9-201ENST00000429856 646 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 HMGB1P27-201ENST00000431429 603 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.92□□□□□ -1.78
CNOT4O95628 SUMO1P3-201ENST00000439961 304 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.92□□□□□ -1.78
CNOT4O95628 AC073910.1-201ENST00000445047 438 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 PRDX3P3-201ENST00000447765 522 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 RN7SL98P-201ENST00000462271 300 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 RPL21P126-201ENST00000470049 478 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 SNORA40.14-201ENST00000516543 86 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 SNORA31.22-201ENST00000517204 135 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 AC023157.2-201ENST00000540596 141 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 MIR4474-201ENST00000579189 78 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 AC078899.3-201ENST00000599065 212 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 AC244505.7-201ENST00000599675 272 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 AC004805.2-201ENST00000605382 482 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 AC005344.1-201ENST00000613391 459 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CNOT4O95628 AL031601.2-202ENST00000622650 282 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 AC138627.2-201ENST00000624202 601 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 AC008785.1-201ENST00000624475 456 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CNOT4O95628 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CNOT4O95628 AC008669.1-201ENST00000565823 2178 ntBASIC3.92□□□□□ -1.78
CNOT4O95628 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNOT4O95628 RNU1-20P-201ENST00000363314 162 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 SNORD73A-201ENST00000386062 65 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CNOT4O95628 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CNOT4O95628 RNU6-174P-201ENST00000410406 106 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.91□□□□□ -1.78
CNOT4O95628 TMSB10P2-201ENST00000416049 131 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 PGBD4P6-201ENST00000421501 610 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 RPL7P2-201ENST00000427639 268 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 RPS29P17-201ENST00000430795 166 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 AL353997.1-201ENST00000432936 108 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.91□□□□□ -1.78
CNOT4O95628 DAP3P1-201ENST00000441522 278 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 AL031274.1-201ENST00000450334 232 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 CHEK2P4-201ENST00000450340 246 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 AC022447.4-201ENST00000504053 364 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 MTND3P25-201ENST00000509243 135 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.91□□□□□ -1.78
CNOT4O95628 RNU6-914P-201ENST00000516749 109 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 AC087369.1-201ENST00000520775 996 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 IGHV3-76-201ENST00000522465 295 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.91□□□□□ -1.78
CNOT4O95628 AC040926.1-201ENST00000530195 238 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.91□□□□□ -1.78
CNOT4O95628 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.91□□□□□ -1.78
CNOT4O95628 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.91□□□□□ -1.78
CNOT4O95628 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.91□□□□□ -1.78
CNOT4O95628 MIR5188-201ENST00000583467 113 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 AC125232.2-201ENST00000592457 143 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 AL160281.1-201ENST00000605307 311 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 HMGB1P50-201ENST00000605814 607 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.91□□□□□ -1.78
CNOT4O95628 MIR6891-201ENST00000618788 93 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 AC006111.3-201ENST00000622137 383 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CNOT4O95628 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNOT4O95628 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CNOT4O95628 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CNOT4O95628 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNOT4O95628 CUL1P1-201ENST00000509510 2425 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 AC090740.1-201ENST00000623193 2262 ntBASIC3.91□□□□□ -1.78
CNOT4O95628 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CNOT4O95628 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
CNOT4O95628 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CNOT4O95628 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.9□□□□□ -1.78
CNOT4O95628 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CNOT4O95628 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CNOT4O95628 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CNOT4O95628 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CNOT4O95628 MIR448-201ENST00000362131 111 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 Y_RNA.276-201ENST00000364732 109 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 RNU4-42P-201ENST00000364738 142 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 Y_RNA.350-201ENST00000365409 98 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 AL359837.1-201ENST00000381357 287 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 RNU1-63P-201ENST00000383902 164 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CNOT4O95628 AL138885.1-201ENST00000405921 675 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 MIR548I3-201ENST00000408378 149 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 MIR548I1-201ENST00000408810 149 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 RNU6-1156P-201ENST00000410365 100 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.9□□□□□ -1.79
CNOT4O95628 AL360271.2-201ENST00000447710 161 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 RNA5SP310-201ENST00000459084 116 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 AC093852.1-201ENST00000503587 266 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 MRPL49P2-201ENST00000521066 465 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.9□□□□□ -1.79
CNOT4O95628 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.9□□□□□ -1.79
CNOT4O95628 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.9□□□□□ -1.79
CNOT4O95628 LRRC37A5P-203ENST00000580181 585 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 MIR548AC-201ENST00000585049 88 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 OR1M4P-201ENST00000589199 287 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.9□□□□□ -1.79
CNOT4O95628 AC113403.1-201ENST00000604910 193 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms