Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.85□□□□□ -2.27
ABCA1O95477 AL929288.2-201ENST00000446368 407 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.85□□□□□ -2.27
ABCA1O95477 RPL26P9-201ENST00000457466 433 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 RNU1-98P-201ENST00000458992 160 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 AC005410.1-202ENST00000460347 485 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 BOLA3P3-201ENST00000505182 232 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 RNA5SP112-201ENST00000515937 99 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.85□□□□□ -2.27
ABCA1O95477 BNIP3P24-201ENST00000593398 557 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 AC103810.8-201ENST00000607347 118 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 AC073968.1-201ENST00000618594 637 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 AP002791.1-201ENST00000623291 381 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 AC090617.9-201ENST00000623751 147 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 RNU6-251P-201ENST00000363235 104 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 RNU6-619P-201ENST00000365146 108 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 TXNP7-201ENST00000406296 293 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 ZNF965P-201ENST00000432501 817 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.85□□□□□ -2.27
ABCA1O95477 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.85□□□□□ -2.27
ABCA1O95477 HAR1A.1-201ENST00000459583 118 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 RPS23P4-201ENST00000487908 423 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 AC008834.1-201ENST00000511612 175 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 RNA5SP384-201ENST00000516615 116 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 RNA5SP337-201ENST00000517007 109 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.85□□□□□ -2.27
ABCA1O95477 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.85□□□□□ -2.27
ABCA1O95477 VN1R88P-201ENST00000596787 292 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.85□□□□□ -2.27
ABCA1O95477 AL138963.2-201ENST00000605137 226 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 MTCO1P23-201ENST00000415223 1526 ntBASIC0.84□□□□□ -2.27
ABCA1O95477 AC091812.1-201ENST00000432235 1948 ntBASIC0.84□□□□□ -2.27
ABCA1O95477 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.84□□□□□ -2.27
ABCA1O95477 RNU6-19P-201ENST00000384718 107 ntBASIC0.84□□□□□ -2.27
ABCA1O95477 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
ABCA1O95477 FCF1P2-201ENST00000415284 583 ntBASIC0.84□□□□□ -2.27
ABCA1O95477 MTCO1P53-201ENST00000441633 699 ntBASIC0.84□□□□□ -2.27
ABCA1O95477 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
ABCA1O95477 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.84□□□□□ -2.27
ABCA1O95477 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
ABCA1O95477 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.84□□□□□ -2.27
ABCA1O95477 SNORA31.6-201ENST00000516241 130 ntBASIC0.84□□□□□ -2.27
ABCA1O95477 RNU7-193P-201ENST00000516723 65 ntBASIC0.84□□□□□ -2.27
ABCA1O95477 AC036111.3-201ENST00000526389 112 ntBASIC0.84□□□□□ -2.27
ABCA1O95477 SNORD39.3-201ENST00000584451 71 ntBASIC0.84□□□□□ -2.27
ABCA1O95477 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.84□□□□□ -2.27
ABCA1O95477 U4atac.1-201ENST00000618345 95 ntBASIC0.84□□□□□ -2.27
ABCA1O95477 AL445493.3-201ENST00000619568 477 ntBASIC0.84□□□□□ -2.27
ABCA1O95477 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
ABCA1O95477 AC025263.3-201ENST00000622965 1396 ntBASIC0.84□□□□□ -2.28
ABCA1O95477 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
ABCA1O95477 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
ABCA1O95477 RNU4-42P-201ENST00000364738 142 ntBASIC0.84□□□□□ -2.28
ABCA1O95477 AL161449.1-201ENST00000414531 1199 ntBASIC0.84□□□□□ -2.28
ABCA1O95477 OR51A5P-201ENST00000415429 942 ntBASIC0.84□□□□□ -2.28
ABCA1O95477 NDUFB4P7-201ENST00000423198 363 ntBASIC0.84□□□□□ -2.28
ABCA1O95477 AC093106.2-201ENST00000428212 385 ntBASIC0.84□□□□□ -2.28
ABCA1O95477 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
ABCA1O95477 MTND6P13-201ENST00000443510 523 ntBASIC0.84□□□□□ -2.28
ABCA1O95477 RPL31P58-201ENST00000469001 379 ntBASIC0.84□□□□□ -2.28
ABCA1O95477 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
ABCA1O95477 SMURF2P1-201ENST00000514992 481 ntBASIC0.84□□□□□ -2.28
ABCA1O95477 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.84□□□□□ -2.28
ABCA1O95477 AP004247.1-201ENST00000531556 1289 ntBASIC0.84□□□□□ -2.28
ABCA1O95477 CYCSP2-201ENST00000558168 301 ntBASIC0.84□□□□□ -2.28
ABCA1O95477 AL138955.1-201ENST00000622881 1040 ntBASIC0.84□□□□□ -2.28
ABCA1O95477 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
ABCA1O95477 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.83□□□□□ -2.28
ABCA1O95477 Y_RNA.115-201ENST00000363272 98 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 MIR95-201ENST00000385072 81 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 MTCO2P31-201ENST00000402702 684 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 CCNG1P1-201ENST00000406783 885 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.83□□□□□ -2.28
ABCA1O95477 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.83□□□□□ -2.28
ABCA1O95477 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.83□□□□□ -2.28
ABCA1O95477 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 KATNBL1P6-201ENST00000453433 915 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.83□□□□□ -2.28
ABCA1O95477 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.83□□□□□ -2.28
ABCA1O95477 SNORD97-201ENST00000459187 142 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 MTCO1P31-201ENST00000506355 492 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 AC113420.1-201ENST00000507903 571 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.83□□□□□ -2.28
ABCA1O95477 RNA5SP135-201ENST00000517019 125 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.83□□□□□ -2.28
ABCA1O95477 MIR3126-201ENST00000577443 74 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
ABCA1O95477 AC068276.1-201ENST00000605793 379 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 AC004067.1-201ENST00000608733 700 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 AL121652.1-201ENST00000608851 448 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 AL592148.2-201ENST00000612210 372 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 AC010487.4-201ENST00000637027 61 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 U2.21-201ENST00000637295 81 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
ABCA1O95477 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
ABCA1O95477 TEX21P-201ENST00000447107 1476 ntBASIC0.83□□□□□ -2.28
ABCA1O95477 MIR150-201ENST00000385048 84 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 MIR29C-201ENST00000385231 88 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms