Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.1□□□□□ -2.07
CTDNEP1O95476 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.1□□□□□ -2.07
CTDNEP1O95476 MIR4419B-201ENST00000577260 68 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 MIR3915-201ENST00000578518 97 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.1□□□□□ -2.07
CTDNEP1O95476 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.1□□□□□ -2.07
CTDNEP1O95476 AC093838.1-201ENST00000613014 469 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 MIR7844-201ENST00000616161 122 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 AC008147.4-201ENST00000617570 1204 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 AL159972.1-201ENST00000625150 448 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 AC110994.2-201ENST00000635481 492 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 AC006927.3-201ENST00000638789 384 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CTDNEP1O95476 KPNA2P1-201ENST00000458289 1591 ntBASIC2.1□□□□□ -2.07
CTDNEP1O95476 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CTDNEP1O95476 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CTDNEP1O95476 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.1□□□□□ -2.07
CTDNEP1O95476 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CTDNEP1O95476 RNU6-432P-201ENST00000384196 109 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 RNU6-809P-201ENST00000384461 107 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 AL031577.2-201ENST00000404133 280 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 AC008850.1-201ENST00000427546 362 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 RPL37P21-201ENST00000435890 276 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 KATNBL1P6-201ENST00000453433 915 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 LARP1BP2-201ENST00000486594 519 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 AC116347.2-201ENST00000514912 523 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 SCARNA15.2-201ENST00000516409 127 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 RNU6-1256P-201ENST00000516539 103 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 AC123904.2-201ENST00000548059 300 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 ZNF519P3-201ENST00000557158 1032 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 NIFKP6-201ENST00000598115 845 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 AL355877.2-201ENST00000603670 358 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 AC112187.2-201ENST00000604345 283 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 AL022161.1-201ENST00000604390 213 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 AC105129.3-201ENST00000605455 485 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CTDNEP1O95476 AC007038.2-201ENST00000608095 740 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 MIR6840-201ENST00000611937 71 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 AC122133.1-201ENST00000613964 233 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 AL136313.1-201ENST00000624804 202 ntBASIC2.09□□□□□ -2.07
CTDNEP1O95476 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CTDNEP1O95476 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
CTDNEP1O95476 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CTDNEP1O95476 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CTDNEP1O95476 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CTDNEP1O95476 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CTDNEP1O95476 MIR325-201ENST00000385260 98 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 AF228730.1-201ENST00000397972 663 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 SNORA11.2-201ENST00000408318 127 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.08□□□□□ -2.08
CTDNEP1O95476 USP9YP13-201ENST00000417797 480 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.08□□□□□ -2.08
CTDNEP1O95476 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.08□□□□□ -2.08
CTDNEP1O95476 MTND4P20-201ENST00000424125 869 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.08□□□□□ -2.08
CTDNEP1O95476 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.08□□□□□ -2.08
CTDNEP1O95476 GTF2IP20-201ENST00000431663 360 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.08□□□□□ -2.08
CTDNEP1O95476 IPO7P1-201ENST00000442031 636 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 AC118469.1-201ENST00000442943 488 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 BMI1P1-201ENST00000445879 941 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.08□□□□□ -2.08
CTDNEP1O95476 AC010631.1-201ENST00000474150 156 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.08□□□□□ -2.08
CTDNEP1O95476 BTF3P12-201ENST00000519620 469 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.08□□□□□ -2.08
CTDNEP1O95476 AC023824.2-201ENST00000566185 400 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 AL356432.3-201ENST00000568952 465 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 MIR5697-201ENST00000578045 78 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 MIR4293-201ENST00000584305 78 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 AC013412.1-201ENST00000610687 192 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CTDNEP1O95476 AF246928.1-201ENST00000623768 87 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 AC097520.1-201ENST00000624435 385 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 AC007494.3-201ENST00000624660 743 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 DDX10P1-201ENST00000448545 1933 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.08□□□□□ -2.08
CTDNEP1O95476 AL596028.1-201ENST00000326971 197 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 RNU6-501P-201ENST00000364072 100 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 U8.13-201ENST00000390842 128 ntBASIC2.07□□□□□ -2.08
CTDNEP1O95476 AL109755.1-201ENST00000401791 649 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms