Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RNU5F-8P-201ENST00000515941 111 ntBASIC2.74□□□□□ -1.97
SIX3O95343 RNA5SP356-201ENST00000515972 94 ntBASIC2.74□□□□□ -1.97
SIX3O95343 RNU6-581P-201ENST00000516214 105 ntBASIC2.74□□□□□ -1.97
SIX3O95343 SNORA18.6-201ENST00000516792 115 ntBASIC2.74□□□□□ -1.97
SIX3O95343 RNU6-703P-201ENST00000516946 107 ntBASIC2.74□□□□□ -1.97
SIX3O95343 SNORD19.2-201ENST00000516978 73 ntBASIC2.74□□□□□ -1.97
SIX3O95343 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.74□□□□□ -1.97
SIX3O95343 OR5B19P-201ENST00000531766 928 ntBASIC2.74□□□□□ -1.97
SIX3O95343 AC107016.2-201ENST00000547968 190 ntBASIC2.74□□□□□ -1.97
SIX3O95343 LINC00933-203ENST00000559812 219 ntBASIC2.74□□□□□ -1.97
SIX3O95343 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.74□□□□□ -1.97
SIX3O95343 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.74□□□□□ -1.97
SIX3O95343 AC005261.5-201ENST00000596280 355 ntBASIC2.74□□□□□ -1.97
SIX3O95343 AC078899.3-201ENST00000599065 212 ntBASIC2.74□□□□□ -1.97
SIX3O95343 Z94722.1-201ENST00000604328 474 ntBASIC2.74□□□□□ -1.97
SIX3O95343 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.74□□□□□ -1.97
SIX3O95343 AL670379.4-201ENST00000605279 254 ntBASIC2.74□□□□□ -1.97
SIX3O95343 AC091304.9-201ENST00000612091 226 ntBASIC2.74□□□□□ -1.97
SIX3O95343 AL137790.1-201ENST00000634283 177 ntBASIC2.74□□□□□ -1.97
SIX3O95343 MIR6733-201ENST00000635723 61 ntBASIC2.74□□□□□ -1.97
SIX3O95343 LRRC77P-213ENST00000637727 880 ntBASIC2.74□□□□□ -1.97
SIX3O95343 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.74□□□□□ -1.97
SIX3O95343 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
SIX3O95343 RNU6-179P-201ENST00000363350 107 ntBASIC2.73□□□□□ -1.97
SIX3O95343 RNU4-91P-201ENST00000364778 135 ntBASIC2.73□□□□□ -1.97
SIX3O95343 SET-203ENST00000372688 801 ntTSL 2 BASIC2.73□□□□□ -1.97
SIX3O95343 CISD1P1-201ENST00000393907 327 ntBASIC2.73□□□□□ -1.97
SIX3O95343 AC114491.1-201ENST00000416095 246 ntBASIC2.73□□□□□ -1.97
SIX3O95343 AL139281.1-201ENST00000422120 335 ntBASIC2.73□□□□□ -1.97
SIX3O95343 PTGES3P4-201ENST00000426243 356 ntBASIC2.73□□□□□ -1.97
SIX3O95343 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.73□□□□□ -1.97
SIX3O95343 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.73□□□□□ -1.97
SIX3O95343 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SIX3O95343 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SIX3O95343 AC012308.1-201ENST00000451232 178 ntBASIC2.73□□□□□ -1.97
SIX3O95343 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.73□□□□□ -1.97
SIX3O95343 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.73□□□□□ -1.97
SIX3O95343 RNU6-123P-201ENST00000516163 102 ntBASIC2.73□□□□□ -1.97
SIX3O95343 RN7SKP40-201ENST00000517211 242 ntBASIC2.73□□□□□ -1.97
SIX3O95343 SCARNA11.3-201ENST00000517276 130 ntBASIC2.73□□□□□ -1.97
SIX3O95343 AC007536.1-201ENST00000533382 349 ntBASIC2.73□□□□□ -1.97
SIX3O95343 MIR1273C-201ENST00000578669 77 ntBASIC2.73□□□□□ -1.97
SIX3O95343 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.73□□□□□ -1.97
SIX3O95343 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.73□□□□□ -1.97
SIX3O95343 ZNF861P-201ENST00000588126 639 ntBASIC2.73□□□□□ -1.97
SIX3O95343 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.73□□□□□ -1.97
SIX3O95343 AL603839.4-201ENST00000624658 1005 ntBASIC2.73□□□□□ -1.97
SIX3O95343 U6.114-201ENST00000636407 96 ntBASIC2.73□□□□□ -1.97
SIX3O95343 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SIX3O95343 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.73□□□□□ -1.97
SIX3O95343 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.72□□□□□ -1.97
SIX3O95343 AL136360.1-201ENST00000503377 1900 ntBASIC2.72□□□□□ -1.97
SIX3O95343 SNORD116-8-201ENST00000384365 95 ntBASIC2.72□□□□□ -1.97
SIX3O95343 Y_RNA.534-201ENST00000384599 112 ntBASIC2.72□□□□□ -1.97
SIX3O95343 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SIX3O95343 AL512633.1-201ENST00000399931 655 ntBASIC2.72□□□□□ -1.97
SIX3O95343 AL138885.1-201ENST00000405921 675 ntBASIC2.72□□□□□ -1.97
SIX3O95343 RNU2-25P-201ENST00000411041 191 ntBASIC2.72□□□□□ -1.97
SIX3O95343 RN7SKP142-201ENST00000411236 328 ntBASIC2.72□□□□□ -1.97
SIX3O95343 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.72□□□□□ -1.97
SIX3O95343 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.72□□□□□ -1.97
SIX3O95343 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.72□□□□□ -1.97
SIX3O95343 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.72□□□□□ -1.97
SIX3O95343 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.72□□□□□ -1.97
SIX3O95343 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.72□□□□□ -1.97
SIX3O95343 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.72□□□□□ -1.97
SIX3O95343 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.72□□□□□ -1.97
SIX3O95343 PGBD4P3-201ENST00000440731 581 ntBASIC2.72□□□□□ -1.97
SIX3O95343 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.72□□□□□ -1.97
SIX3O95343 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.72□□□□□ -1.97
SIX3O95343 snoU13.26-201ENST00000459452 105 ntBASIC2.72□□□□□ -1.97
SIX3O95343 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.72□□□□□ -1.97
SIX3O95343 SNORA9.3-201ENST00000516383 129 ntBASIC2.72□□□□□ -1.97
SIX3O95343 RANP3-201ENST00000530970 276 ntBASIC2.72□□□□□ -1.97
SIX3O95343 AC022080.3-201ENST00000544433 482 ntBASIC2.72□□□□□ -1.97
SIX3O95343 AC098848.2-201ENST00000588023 330 ntBASIC2.72□□□□□ -1.97
SIX3O95343 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.72□□□□□ -1.97
SIX3O95343 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.72□□□□□ -1.97
SIX3O95343 AC135507.1-201ENST00000607214 561 ntBASIC2.72□□□□□ -1.97
SIX3O95343 AL451064.1-201ENST00000607718 471 ntBASIC2.72□□□□□ -1.97
SIX3O95343 AC012409.4-201ENST00000612923 249 ntBASIC2.72□□□□□ -1.97
SIX3O95343 U6.42-201ENST00000618440 107 ntBASIC2.72□□□□□ -1.97
SIX3O95343 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SIX3O95343 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
SIX3O95343 AC093010.3-201ENST00000570269 15214 ntBASIC2.71□□□□□ -1.97
SIX3O95343 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
SIX3O95343 MTND5P30-201ENST00000452896 1731 ntBASIC2.71□□□□□ -1.98
SIX3O95343 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
SIX3O95343 AC096644.4-201ENST00000563417 2912 ntBASIC2.71□□□□□ -1.98
SIX3O95343 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
SIX3O95343 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SIX3O95343 RNU6-461P-201ENST00000364195 107 ntBASIC2.71□□□□□ -1.98
SIX3O95343 RNU6-898P-201ENST00000365627 104 ntBASIC2.71□□□□□ -1.98
SIX3O95343 RNU6-851P-201ENST00000384565 107 ntBASIC2.71□□□□□ -1.98
SIX3O95343 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.71□□□□□ -1.98
SIX3O95343 RPL35AP12-201ENST00000425362 338 ntBASIC2.71□□□□□ -1.98
SIX3O95343 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.71□□□□□ -1.98
SIX3O95343 RPL36AP6-201ENST00000435770 321 ntBASIC2.71□□□□□ -1.98
SIX3O95343 AL445687.1-201ENST00000439946 251 ntBASIC2.71□□□□□ -1.98
SIX3O95343 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms