Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC012435.1-202ENST00000568772 240 ntBASIC1.78□□□□□ -2.12
VAPBO95292 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.78□□□□□ -2.12
VAPBO95292 AC104763.2-201ENST00000604179 382 ntBASIC1.78□□□□□ -2.12
VAPBO95292 AC245297.2-201ENST00000610119 565 ntBASIC1.78□□□□□ -2.12
VAPBO95292 AC009318.2-201ENST00000610917 651 ntBASIC1.78□□□□□ -2.12
VAPBO95292 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
VAPBO95292 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.78□□□□□ -2.12
VAPBO95292 AC017037.3-201ENST00000625016 472 ntBASIC1.78□□□□□ -2.12
VAPBO95292 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.78□□□□□ -2.12
VAPBO95292 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
VAPBO95292 RNA5SP276-201ENST00000362580 94 ntBASIC1.77□□□□□ -2.13
VAPBO95292 SNORD114-1-201ENST00000362705 72 ntBASIC1.77□□□□□ -2.13
VAPBO95292 MIR561-201ENST00000385216 97 ntBASIC1.77□□□□□ -2.13
VAPBO95292 U8.14-201ENST00000390843 143 ntBASIC1.77□□□□□ -2.13
VAPBO95292 SNORA40.18-201ENST00000391200 128 ntBASIC1.77□□□□□ -2.13
VAPBO95292 HMGN2P39-201ENST00000398005 273 ntBASIC1.77□□□□□ -2.13
VAPBO95292 MIR1294-201ENST00000408503 142 ntBASIC1.77□□□□□ -2.13
VAPBO95292 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.77□□□□□ -2.13
VAPBO95292 AL353621.1-201ENST00000418219 243 ntBASIC1.77□□□□□ -2.13
VAPBO95292 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.77□□□□□ -2.13
VAPBO95292 RPL7P34-201ENST00000433316 712 ntBASIC1.77□□□□□ -2.13
VAPBO95292 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.77□□□□□ -2.13
VAPBO95292 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.77□□□□□ -2.13
VAPBO95292 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.77□□□□□ -2.13
VAPBO95292 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.77□□□□□ -2.13
VAPBO95292 USP9YP10-201ENST00000454868 628 ntBASIC1.77□□□□□ -2.13
VAPBO95292 AC112771.1-201ENST00000463581 102 ntBASIC1.77□□□□□ -2.13
VAPBO95292 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
VAPBO95292 RPL23AP41-201ENST00000484754 458 ntBASIC1.77□□□□□ -2.13
VAPBO95292 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.77□□□□□ -2.13
VAPBO95292 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.77□□□□□ -2.13
VAPBO95292 AC109445.1-201ENST00000512356 383 ntBASIC1.77□□□□□ -2.13
VAPBO95292 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.77□□□□□ -2.13
VAPBO95292 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.77□□□□□ -2.13
VAPBO95292 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.77□□□□□ -2.13
VAPBO95292 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.77□□□□□ -2.13
VAPBO95292 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.77□□□□□ -2.13
VAPBO95292 MIR3618-201ENST00000580330 88 ntBASIC1.77□□□□□ -2.13
VAPBO95292 MIR4513-201ENST00000581077 86 ntBASIC1.77□□□□□ -2.13
VAPBO95292 AC243960.4-201ENST00000600532 288 ntBASIC1.77□□□□□ -2.13
VAPBO95292 AC009974.1-201ENST00000608881 455 ntBASIC1.77□□□□□ -2.13
VAPBO95292 AC008121.3-201ENST00000618726 433 ntBASIC1.77□□□□□ -2.13
VAPBO95292 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.77□□□□□ -2.13
VAPBO95292 U3.13-201ENST00000364804 214 ntBASIC1.76□□□□□ -2.13
VAPBO95292 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
VAPBO95292 AL356432.1-201ENST00000405809 419 ntBASIC1.76□□□□□ -2.13
VAPBO95292 AL359704.1-201ENST00000411586 781 ntBASIC1.76□□□□□ -2.13
VAPBO95292 VN1R51P-201ENST00000411675 945 ntBASIC1.76□□□□□ -2.13
VAPBO95292 RPL23AP39-201ENST00000415533 405 ntBASIC1.76□□□□□ -2.13
VAPBO95292 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.76□□□□□ -2.13
VAPBO95292 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.76□□□□□ -2.13
VAPBO95292 AL645568.3-201ENST00000433683 316 ntBASIC1.76□□□□□ -2.13
VAPBO95292 RPL23AP6-201ENST00000446637 472 ntBASIC1.76□□□□□ -2.13
VAPBO95292 AP000542.1-201ENST00000448473 371 ntBASIC1.76□□□□□ -2.13
VAPBO95292 ZNF886P-201ENST00000450781 723 ntBASIC1.76□□□□□ -2.13
VAPBO95292 RPL23AP42-201ENST00000471152 471 ntBASIC1.76□□□□□ -2.13
VAPBO95292 UBL5P3-201ENST00000475112 231 ntBASIC1.76□□□□□ -2.13
VAPBO95292 AC068587.2-201ENST00000478386 781 ntBASIC1.76□□□□□ -2.13
VAPBO95292 ACA59.2-201ENST00000517061 156 ntBASIC1.76□□□□□ -2.13
VAPBO95292 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.76□□□□□ -2.13
VAPBO95292 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
VAPBO95292 AC092451.2-201ENST00000538746 658 ntBASIC1.76□□□□□ -2.13
VAPBO95292 PSMA3P-201ENST00000555485 635 ntBASIC1.76□□□□□ -2.13
VAPBO95292 AC009712.1-201ENST00000564938 316 ntBASIC1.76□□□□□ -2.13
VAPBO95292 MIR4782-201ENST00000577987 79 ntBASIC1.76□□□□□ -2.13
VAPBO95292 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
VAPBO95292 AL109918.3-201ENST00000603072 338 ntBASIC1.76□□□□□ -2.13
VAPBO95292 AC087045.1-201ENST00000605856 382 ntBASIC1.76□□□□□ -2.13
VAPBO95292 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.76□□□□□ -2.13
VAPBO95292 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.76□□□□□ -2.13
VAPBO95292 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.76□□□□□ -2.13
VAPBO95292 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.76□□□□□ -2.13
VAPBO95292 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
VAPBO95292 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
VAPBO95292 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.75□□□□□ -2.13
VAPBO95292 AC103710.2-202ENST00000641454 2853 ntBASIC1.75□□□□□ -2.13
VAPBO95292 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.75□□□□□ -2.13
VAPBO95292 RNU6-777P-201ENST00000364265 104 ntBASIC1.75□□□□□ -2.13
VAPBO95292 SNORD48-201ENST00000364953 64 ntBASIC1.75□□□□□ -2.13
VAPBO95292 RNU6-234P-201ENST00000365229 104 ntBASIC1.75□□□□□ -2.13
VAPBO95292 MIR19A-201ENST00000384878 82 ntBASIC1.75□□□□□ -2.13
VAPBO95292 SNORA40.19-201ENST00000390846 128 ntBASIC1.75□□□□□ -2.13
VAPBO95292 AL139397.2-201ENST00000404529 772 ntBASIC1.75□□□□□ -2.13
VAPBO95292 AC083875.1-201ENST00000419509 405 ntBASIC1.75□□□□□ -2.13
VAPBO95292 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.75□□□□□ -2.13
VAPBO95292 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.75□□□□□ -2.13
VAPBO95292 AC005094.1-201ENST00000440420 368 ntBASIC1.75□□□□□ -2.13
VAPBO95292 RPL32P28-201ENST00000443577 397 ntBASIC1.75□□□□□ -2.13
VAPBO95292 EEF1E1P1-201ENST00000446998 430 ntBASIC1.75□□□□□ -2.13
VAPBO95292 AC007327.1-201ENST00000447461 264 ntBASIC1.75□□□□□ -2.13
VAPBO95292 AL136380.1-201ENST00000447970 162 ntBASIC1.75□□□□□ -2.13
VAPBO95292 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.75□□□□□ -2.13
VAPBO95292 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.75□□□□□ -2.13
VAPBO95292 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.75□□□□□ -2.13
VAPBO95292 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.75□□□□□ -2.13
VAPBO95292 RPL21P99-201ENST00000480369 423 ntBASIC1.75□□□□□ -2.13
VAPBO95292 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.75□□□□□ -2.13
VAPBO95292 HMGB1P35-201ENST00000503360 598 ntBASIC1.75□□□□□ -2.13
VAPBO95292 AC116655.1-201ENST00000508324 901 ntBASIC1.75□□□□□ -2.13
VAPBO95292 RNA5SP216-201ENST00000516111 123 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms