Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RABEPKP1-201ENST00000440529 1026 ntBASIC0.16□□□□□ -2.38
USH2AO75445 RNY4-201ENST00000516507 96 ntBASIC0.16□□□□□ -2.38
USH2AO75445 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.16□□□□□ -2.38
USH2AO75445 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.15□□□□□ -2.38
USH2AO75445 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.38
USH2AO75445 RNA5SP450-201ENST00000411206 102 ntBASIC0.15□□□□□ -2.38
USH2AO75445 AC009518.2-201ENST00000418056 731 ntBASIC0.15□□□□□ -2.38
USH2AO75445 RPS24P6-201ENST00000452670 400 ntBASIC0.15□□□□□ -2.38
USH2AO75445 U8.21-201ENST00000459536 136 ntBASIC0.15□□□□□ -2.38
USH2AO75445 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.15□□□□□ -2.38
USH2AO75445 RRN3P3-201ENST00000549207 578 ntBASIC0.15□□□□□ -2.38
USH2AO75445 Y_RNA.117-201ENST00000363294 101 ntBASIC0.15□□□□□ -2.39
USH2AO75445 U3.8-201ENST00000363675 217 ntBASIC0.15□□□□□ -2.39
USH2AO75445 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.15□□□□□ -2.39
USH2AO75445 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.15□□□□□ -2.39
USH2AO75445 AP000797.1-201ENST00000478870 387 ntBASIC0.15□□□□□ -2.39
USH2AO75445 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.15□□□□□ -2.39
USH2AO75445 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.15□□□□□ -2.39
USH2AO75445 AP001485.1-201ENST00000604799 199 ntBASIC0.15□□□□□ -2.39
USH2AO75445 MIR6130-201ENST00000619419 109 ntBASIC0.15□□□□□ -2.39
USH2AO75445 AC109454.4-201ENST00000623411 649 ntBASIC0.15□□□□□ -2.39
USH2AO75445 RNU6-1187P-201ENST00000364771 110 ntBASIC0.15□□□□□ -2.39
USH2AO75445 RNU2-71P-201ENST00000411395 189 ntBASIC0.15□□□□□ -2.39
USH2AO75445 TMEM167AP1-201ENST00000423409 219 ntBASIC0.15□□□□□ -2.39
USH2AO75445 HSPE1P9-201ENST00000440046 311 ntBASIC0.15□□□□□ -2.39
USH2AO75445 AC079448.1-201ENST00000449377 373 ntBASIC0.15□□□□□ -2.39
USH2AO75445 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.15□□□□□ -2.39
USH2AO75445 RNA5SP108-201ENST00000605921 117 ntBASIC0.15□□□□□ -2.39
USH2AO75445 AC027335.2-201ENST00000624030 375 ntBASIC0.15□□□□□ -2.39
USH2AO75445 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.15□□□□□ -2.39
USH2AO75445 AC023934.1-201ENST00000574529 2389 ntBASIC0.15□□□□□ -2.39
USH2AO75445 RNU6-514P-201ENST00000384208 107 ntBASIC0.15□□□□□ -2.39
USH2AO75445 RNU6-160P-201ENST00000384591 107 ntBASIC0.15□□□□□ -2.39
USH2AO75445 RNU6-1077P-201ENST00000410506 102 ntBASIC0.15□□□□□ -2.39
USH2AO75445 RNA5SP222-201ENST00000411039 105 ntBASIC0.15□□□□□ -2.39
USH2AO75445 RNU6-575P-201ENST00000411326 105 ntBASIC0.15□□□□□ -2.39
USH2AO75445 AC096533.1-201ENST00000411645 353 ntBASIC0.15□□□□□ -2.39
USH2AO75445 PRELID3BP11-201ENST00000414230 479 ntBASIC0.15□□□□□ -2.39
USH2AO75445 HSPE1P21-201ENST00000438283 308 ntBASIC0.15□□□□□ -2.39
USH2AO75445 AC078857.1-201ENST00000469870 667 ntBASIC0.15□□□□□ -2.39
USH2AO75445 AC055731.1-201ENST00000474387 401 ntBASIC0.15□□□□□ -2.39
USH2AO75445 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.15□□□□□ -2.39
USH2AO75445 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.15□□□□□ -2.39
USH2AO75445 AL713866.2-201ENST00000603579 219 ntBASIC0.15□□□□□ -2.39
USH2AO75445 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.15□□□□□ -2.39
USH2AO75445 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.14□□□□□ -2.39
USH2AO75445 HMGN2P30-201ENST00000423237 256 ntBASIC0.14□□□□□ -2.39
USH2AO75445 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.14□□□□□ -2.39
USH2AO75445 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.14□□□□□ -2.39
USH2AO75445 RPL31P3-201ENST00000458430 332 ntBASIC0.14□□□□□ -2.39
USH2AO75445 AC139453.3-201ENST00000493276 369 ntBASIC0.14□□□□□ -2.39
USH2AO75445 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.14□□□□□ -2.39
USH2AO75445 AC012414.6-201ENST00000568241 401 ntBASIC0.14□□□□□ -2.39
USH2AO75445 MIR3198-2-201ENST00000577868 80 ntBASIC0.14□□□□□ -2.39
USH2AO75445 AC087685.1-201ENST00000587507 141 ntBASIC0.14□□□□□ -2.39
USH2AO75445 AC138627.2-201ENST00000624202 601 ntBASIC0.14□□□□□ -2.39
USH2AO75445 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.14□□□□□ -2.39
USH2AO75445 RNU6-1097P-201ENST00000363586 107 ntBASIC0.14□□□□□ -2.39
USH2AO75445 Y_RNA.475-201ENST00000384345 101 ntBASIC0.14□□□□□ -2.39
USH2AO75445 NF1P3-201ENST00000457709 450 ntBASIC0.14□□□□□ -2.39
USH2AO75445 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.14□□□□□ -2.39
USH2AO75445 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.14□□□□□ -2.39
USH2AO75445 AC025449.1-201ENST00000603896 529 ntBASIC0.14□□□□□ -2.39
USH2AO75445 RNA5SP361-201ENST00000362686 118 ntBASIC0.14□□□□□ -2.39
USH2AO75445 SNORA38-201ENST00000363946 132 ntBASIC0.14□□□□□ -2.39
USH2AO75445 AL356432.1-201ENST00000405809 419 ntBASIC0.14□□□□□ -2.39
USH2AO75445 AL591034.1-201ENST00000407447 340 ntBASIC0.14□□□□□ -2.39
USH2AO75445 XKRYP1-201ENST00000423438 492 ntBASIC0.14□□□□□ -2.39
USH2AO75445 XKRYP2-201ENST00000432915 492 ntBASIC0.14□□□□□ -2.39
USH2AO75445 RPL39P29-201ENST00000447779 157 ntBASIC0.14□□□□□ -2.39
USH2AO75445 AC138853.1-201ENST00000503549 823 ntBASIC0.14□□□□□ -2.39
USH2AO75445 AL162730.1-201ENST00000605734 292 ntBASIC0.14□□□□□ -2.39
USH2AO75445 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.14□□□□□ -2.39
USH2AO75445 AP003476.1-201ENST00000623984 516 ntBASIC0.14□□□□□ -2.39
USH2AO75445 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
USH2AO75445 SNORA25.3-201ENST00000363205 127 ntBASIC0.14□□□□□ -2.39
USH2AO75445 RPL22P18-201ENST00000417197 377 ntBASIC0.14□□□□□ -2.39
USH2AO75445 AL035410.1-201ENST00000427409 427 ntBASIC0.14□□□□□ -2.39
USH2AO75445 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.14□□□□□ -2.39
USH2AO75445 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.14□□□□□ -2.39
USH2AO75445 MIR4645-201ENST00000583158 77 ntBASIC0.14□□□□□ -2.39
USH2AO75445 RNU4-9P-201ENST00000364951 139 ntBASIC0.13□□□□□ -2.39
USH2AO75445 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.13□□□□□ -2.39
USH2AO75445 RPL23AP6-201ENST00000446637 472 ntBASIC0.13□□□□□ -2.39
USH2AO75445 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.13□□□□□ -2.39
USH2AO75445 HMGN2P16-201ENST00000456802 261 ntBASIC0.13□□□□□ -2.39
USH2AO75445 SNORD54-201ENST00000459159 67 ntBASIC0.13□□□□□ -2.39
USH2AO75445 RNA5SP461-201ENST00000516451 104 ntBASIC0.13□□□□□ -2.39
USH2AO75445 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.13□□□□□ -2.39
USH2AO75445 AP003717.3-201ENST00000544832 1180 ntBASIC0.13□□□□□ -2.39
USH2AO75445 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.13□□□□□ -2.39
USH2AO75445 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.13□□□□□ -2.39
USH2AO75445 AC090616.5-202ENST00000582111 297 ntBASIC0.13□□□□□ -2.39
USH2AO75445 AP001269.3-201ENST00000588718 329 ntBASIC0.13□□□□□ -2.39
USH2AO75445 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.13□□□□□ -2.39
USH2AO75445 RNU6-1222P-201ENST00000384615 107 ntBASIC0.13□□□□□ -2.39
USH2AO75445 AC023141.4-201ENST00000412031 328 ntBASIC0.13□□□□□ -2.39
USH2AO75445 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.13□□□□□ -2.39
USH2AO75445 AC092634.6-201ENST00000418558 192 ntBASIC0.13□□□□□ -2.39
USH2AO75445 RPL7P29-201ENST00000437151 728 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms