Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 RNU2-58P-201ENST00000516403 183 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 MIR2114-201ENST00000516645 80 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 AC109479.2-201ENST00000517842 174 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 AC007991.1-201ENST00000522680 631 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRPF40AO75400 PARP1P2-201ENST00000556806 195 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.74□□□□□ -1.65
PRPF40AO75400 MIR3690-201ENST00000580266 75 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 AC023575.1-201ENST00000580510 358 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 AC092447.9-201ENST00000603395 144 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 AC025946.2-201ENST00000603398 234 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 AL161629.2-201ENST00000615347 275 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 AL162373.1-201ENST00000620433 407 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.74□□□□□ -1.65
PRPF40AO75400 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.74□□□□□ -1.65
PRPF40AO75400 AC140479.6-201ENST00000633535 357 ntBASIC4.74□□□□□ -1.65
PRPF40AO75400 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.74□□□□□ -1.65
PRPF40AO75400 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PRPF40AO75400 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRPF40AO75400 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
PRPF40AO75400 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
PRPF40AO75400 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.73□□□□□ -1.65
PRPF40AO75400 RNA5SP502-201ENST00000362694 119 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 RNU1-14P-201ENST00000362759 152 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 Y_RNA.80-201ENST00000362996 102 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 DEFB109C-201ENST00000382575 264 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 DEFB109B-201ENST00000382656 264 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 RNU6-463P-201ENST00000384340 107 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 Y_RNA.527-201ENST00000384573 102 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.73□□□□□ -1.65
PRPF40AO75400 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.73□□□□□ -1.65
PRPF40AO75400 AC011933.1-201ENST00000413334 321 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 AL353997.1-201ENST00000432936 108 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.73□□□□□ -1.65
PRPF40AO75400 AC133134.1-201ENST00000466800 359 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.73□□□□□ -1.65
PRPF40AO75400 AF213884.1-201ENST00000488102 463 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.73□□□□□ -1.65
PRPF40AO75400 AC146944.2-203ENST00000502493 354 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 BTF3L4P4-201ENST00000506381 449 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 AC026726.1-201ENST00000512859 601 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 AC139495.1-202ENST00000513164 354 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 RNA5SP519-201ENST00000516480 119 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 RNU7-143P-201ENST00000516781 65 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 RN7SKP289-201ENST00000517244 295 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PRPF40AO75400 GNAI2P1-201ENST00000541815 315 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.73□□□□□ -1.65
PRPF40AO75400 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.73□□□□□ -1.65
PRPF40AO75400 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 7SK.10-201ENST00000621414 298 ntBASIC4.73□□□□□ -1.65
PRPF40AO75400 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PRPF40AO75400 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.73□□□□□ -1.65
PRPF40AO75400 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRPF40AO75400 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.73□□□□□ -1.65
PRPF40AO75400 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PRPF40AO75400 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.73□□□□□ -1.65
PRPF40AO75400 SNORA70.2-201ENST00000364506 135 ntBASIC4.72□□□□□ -1.65
PRPF40AO75400 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.72□□□□□ -1.65
PRPF40AO75400 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
PRPF40AO75400 RNU6-196P-201ENST00000384315 107 ntBASIC4.72□□□□□ -1.65
PRPF40AO75400 MIR521-1-201ENST00000384902 87 ntBASIC4.72□□□□□ -1.65
PRPF40AO75400 AC092047.1-201ENST00000424997 240 ntBASIC4.72□□□□□ -1.65
PRPF40AO75400 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.72□□□□□ -1.65
PRPF40AO75400 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.72□□□□□ -1.65
PRPF40AO75400 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF40AO75400 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.72□□□□□ -1.65
PRPF40AO75400 RN7SL303P-201ENST00000469773 251 ntBASIC4.72□□□□□ -1.65
PRPF40AO75400 RPL17P19-201ENST00000489069 552 ntBASIC4.72□□□□□ -1.65
PRPF40AO75400 AK3P2-201ENST00000507976 429 ntBASIC4.72□□□□□ -1.65
PRPF40AO75400 AC116655.1-201ENST00000508324 901 ntBASIC4.72□□□□□ -1.65
PRPF40AO75400 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.72□□□□□ -1.65
PRPF40AO75400 RN7SKP122-201ENST00000515923 296 ntBASIC4.72□□□□□ -1.65
PRPF40AO75400 SUB1P3-201ENST00000564581 315 ntBASIC4.72□□□□□ -1.65
PRPF40AO75400 MIR4782-201ENST00000577987 79 ntBASIC4.72□□□□□ -1.65
PRPF40AO75400 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.72□□□□□ -1.65
PRPF40AO75400 AL132822.1-201ENST00000617063 513 ntBASIC4.72□□□□□ -1.65
PRPF40AO75400 AC027309.3-201ENST00000623419 351 ntBASIC4.72□□□□□ -1.65
PRPF40AO75400 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.72□□□□□ -1.65
PRPF40AO75400 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF40AO75400 AC005592.1-201ENST00000566527 1640 ntBASIC4.72□□□□□ -1.65
PRPF40AO75400 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
PRPF40AO75400 AC118273.1-201ENST00000525324 3006 ntBASIC4.71□□□□□ -1.66
PRPF40AO75400 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
PRPF40AO75400 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF40AO75400 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF40AO75400 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF40AO75400 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF40AO75400 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF40AO75400 Y_RNA.39-201ENST00000362620 98 ntBASIC4.71□□□□□ -1.66
PRPF40AO75400 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF40AO75400 RNA5SP239-201ENST00000410218 129 ntBASIC4.71□□□□□ -1.66
PRPF40AO75400 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.71□□□□□ -1.66
PRPF40AO75400 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.71□□□□□ -1.66
PRPF40AO75400 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.71□□□□□ -1.66
PRPF40AO75400 AC128713.1-201ENST00000471495 306 ntBASIC4.71□□□□□ -1.66
PRPF40AO75400 AC103996.1-201ENST00000555468 102 ntBASIC4.71□□□□□ -1.66
PRPF40AO75400 AL117187.1-201ENST00000555482 181 ntBASIC4.71□□□□□ -1.66
PRPF40AO75400 CPDP1-201ENST00000579660 283 ntBASIC4.71□□□□□ -1.66
PRPF40AO75400 MIR3939-201ENST00000582614 106 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms