Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 SNORD6-201ENST00000365444 73 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 SNORA36C-201ENST00000384289 132 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 RNU6-45P-201ENST00000384471 107 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 RNU6-1105P-201ENST00000384774 107 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 MIR449B-201ENST00000384995 97 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 SNORD17-201ENST00000390930 237 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 RNA5SP171-201ENST00000391071 115 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.51□□□□□ -1.69
VAMP4O75379 MIR1183-201ENST00000408856 89 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 AC113618.1-201ENST00000416747 285 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.51□□□□□ -1.69
VAMP4O75379 HMGB1P27-201ENST00000431429 603 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 AC073063.1-201ENST00000434352 607 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 RPL26P6-201ENST00000440913 438 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 AL359672.1-201ENST00000442302 409 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.51□□□□□ -1.69
VAMP4O75379 HMGN2P21-201ENST00000447764 270 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 RPL21P41-201ENST00000459863 264 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 AC104472.2-201ENST00000469035 601 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 AC087884.1-201ENST00000469738 328 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.51□□□□□ -1.69
VAMP4O75379 AC005921.1-201ENST00000510589 286 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 ERHP1-201ENST00000523006 310 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 AC026371.1-201ENST00000551867 419 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.51□□□□□ -1.69
VAMP4O75379 PISRT1.1-201ENST00000616930 107 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 PLCE1P1-201ENST00000622094 305 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 AC091925.1-201ENST00000623204 462 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 AC093908.1-201ENST00000623125 8092 ntBASIC4.51□□□□□ -1.69
VAMP4O75379 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VAMP4O75379 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
VAMP4O75379 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VAMP4O75379 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
VAMP4O75379 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VAMP4O75379 AL049781.1-201ENST00000623195 3585 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 AL049641.1-201ENST00000441055 1948 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 OTUD4P1-201ENST00000237841 3067 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
VAMP4O75379 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VAMP4O75379 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
VAMP4O75379 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VAMP4O75379 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VAMP4O75379 RNU6-288P-201ENST00000363690 104 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 RNU6-1032P-201ENST00000384100 107 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 MIR490-201ENST00000384865 128 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 RPS4XP7-201ENST00000406274 780 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VAMP4O75379 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.5□□□□□ -1.69
VAMP4O75379 RPS29P4-201ENST00000414733 161 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 BX842559.1-201ENST00000419615 532 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 AC002075.2-201ENST00000425207 252 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.5□□□□□ -1.69
VAMP4O75379 PRDX3P3-201ENST00000447765 522 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 AL135752.1-201ENST00000479477 471 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 AC025518.1-201ENST00000479856 347 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VAMP4O75379 PTP4A1P4-201ENST00000512479 322 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 AC026782.1-201ENST00000512952 449 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 GMPSP1-201ENST00000514075 579 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 Y_RNA.708-201ENST00000516950 96 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 RNU1-54P-201ENST00000517181 120 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VAMP4O75379 MIR5692A1-201ENST00000580523 69 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 AC012119.1-201ENST00000603184 222 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 AC018462.2-201ENST00000605375 395 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 MIR15A-201ENST00000607334 83 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 AC012531.5-201ENST00000611375 151 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 AC083806.3-201ENST00000614016 455 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 AC015967.1-201ENST00000619893 476 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 AC022149.2-201ENST00000621061 203 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 7SK.10-201ENST00000621414 298 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.5□□□□□ -1.69
VAMP4O75379 AL356274.2-201ENST00000624379 3752 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VAMP4O75379 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VAMP4O75379 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VAMP4O75379 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VAMP4O75379 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.5□□□□□ -1.69
VAMP4O75379 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.5□□□□□ -1.69
VAMP4O75379 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.5□□□□□ -1.69
VAMP4O75379 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VAMP4O75379 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.49□□□□□ -1.69
VAMP4O75379 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.49□□□□□ -1.69
VAMP4O75379 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VAMP4O75379 Y_RNA.148-201ENST00000363557 117 ntBASIC4.49□□□□□ -1.69
VAMP4O75379 Y_RNA.158-201ENST00000363651 101 ntBASIC4.49□□□□□ -1.69
VAMP4O75379 Y_RNA.252-201ENST00000364556 101 ntBASIC4.49□□□□□ -1.69
VAMP4O75379 RNU6-214P-201ENST00000384130 107 ntBASIC4.49□□□□□ -1.69
VAMP4O75379 RNU6-95P-201ENST00000384697 107 ntBASIC4.49□□□□□ -1.69
VAMP4O75379 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.49□□□□□ -1.69
VAMP4O75379 RNU6-1050P-201ENST00000410388 107 ntBASIC4.49□□□□□ -1.69
VAMP4O75379 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.49□□□□□ -1.69
VAMP4O75379 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.49□□□□□ -1.69
VAMP4O75379 MTCO1P39-201ENST00000426148 480 ntBASIC4.49□□□□□ -1.69
VAMP4O75379 AL645568.3-201ENST00000433683 316 ntBASIC4.49□□□□□ -1.69
VAMP4O75379 HMGN2P7-201ENST00000456186 273 ntBASIC4.49□□□□□ -1.69
VAMP4O75379 RN7SL293P-201ENST00000481765 281 ntBASIC4.49□□□□□ -1.69
VAMP4O75379 VN1R104P-201ENST00000505115 1009 ntBASIC4.49□□□□□ -1.69
VAMP4O75379 RNU6-1137P-201ENST00000517073 99 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms