Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 DDX43P2-201ENST00000604753 1354 ntBASIC1.81□□□□□ -2.12
SHOX2O60902 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SHOX2O60902 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.8□□□□□ -2.12
SHOX2O60902 RNU6-224P-201ENST00000384055 107 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 RNA5SP213-201ENST00000391031 106 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 RNU2-2P-201ENST00000410396 191 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 POLR2J4-204ENST00000418424 324 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 Z82205.1-201ENST00000428456 297 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SHOX2O60902 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.8□□□□□ -2.12
SHOX2O60902 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.8□□□□□ -2.12
SHOX2O60902 AL161651.1-201ENST00000440882 223 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 USP9YP15-201ENST00000442391 422 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.8□□□□□ -2.12
SHOX2O60902 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.8□□□□□ -2.12
SHOX2O60902 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.8□□□□□ -2.12
SHOX2O60902 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.8□□□□□ -2.12
SHOX2O60902 RPS15AP36-201ENST00000492022 382 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 RPL22P13-201ENST00000493291 347 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AC005840.1-201ENST00000498412 377 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AC104685.1-201ENST00000502445 371 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.8□□□□□ -2.12
SHOX2O60902 AC113347.3-201ENST00000509113 148 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AC008526.1-201ENST00000509149 338 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AF213884.2-201ENST00000510417 903 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 RNU6-150P-201ENST00000516237 95 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 RNA5SP165-201ENST00000517142 115 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 RNU2-19P-201ENST00000517288 84 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AC021451.1-201ENST00000523498 1129 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 LRRC6P1-201ENST00000532188 885 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.8□□□□□ -2.12
SHOX2O60902 AC006199.1-201ENST00000548728 219 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 CYCSP2-201ENST00000558168 301 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.8□□□□□ -2.12
SHOX2O60902 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.8□□□□□ -2.12
SHOX2O60902 AL512347.1-201ENST00000566420 503 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 MIR3167-201ENST00000579623 85 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SHOX2O60902 AC007229.1-201ENST00000590455 412 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AL670379.6-201ENST00000603753 252 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AL670379.11-201ENST00000604059 253 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AL670379.10-201ENST00000604330 253 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AC008162.1-201ENST00000604718 254 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AL670379.1-201ENST00000604752 252 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AL670379.2-201ENST00000604983 252 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AL670379.5-201ENST00000605253 252 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AL670379.4-201ENST00000605279 254 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AL670379.12-201ENST00000605291 253 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AL670379.8-201ENST00000605353 252 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AL670379.9-201ENST00000605428 253 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AL670379.7-201ENST00000605823 252 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.8□□□□□ -2.12
SHOX2O60902 U2.15-201ENST00000611544 191 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 U2.16-201ENST00000613119 191 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 U2.12-201ENST00000613778 191 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 U2.20-201ENST00000613956 192 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 U2.9-201ENST00000615427 191 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 U2.11-201ENST00000616345 191 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 U2.2-201ENST00000616535 191 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 U2.3-201ENST00000617785 191 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 U2.19-201ENST00000618602 191 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 RNU2-1-201ENST00000618664 191 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 U2.6-201ENST00000619225 191 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 U2.5-201ENST00000619465 191 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 U2.10-201ENST00000620268 191 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 SDR42E1P4-201ENST00000620894 481 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SHOX2O60902 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.8□□□□□ -2.12
SHOX2O60902 RNU6-1167P-201ENST00000363227 94 ntBASIC1.79□□□□□ -2.12
SHOX2O60902 RNU4-51P-201ENST00000364206 140 ntBASIC1.79□□□□□ -2.12
SHOX2O60902 RNY1-201ENST00000364228 113 ntBASIC1.79□□□□□ -2.12
SHOX2O60902 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SHOX2O60902 RNU6-19P-201ENST00000384718 107 ntBASIC1.79□□□□□ -2.12
SHOX2O60902 MIR147B-201ENST00000390185 80 ntBASIC1.79□□□□□ -2.12
SHOX2O60902 MIR676-201ENST00000390702 67 ntBASIC1.79□□□□□ -2.12
SHOX2O60902 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SHOX2O60902 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.79□□□□□ -2.12
SHOX2O60902 RNU2-63P-201ENST00000410792 194 ntBASIC1.79□□□□□ -2.12
SHOX2O60902 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.79□□□□□ -2.12
SHOX2O60902 BTF3L4P3-201ENST00000418879 476 ntBASIC1.79□□□□□ -2.12
SHOX2O60902 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.79□□□□□ -2.12
SHOX2O60902 CECR9-201ENST00000453421 199 ntBASIC1.79□□□□□ -2.12
SHOX2O60902 HMGB1P36-201ENST00000487709 576 ntBASIC1.79□□□□□ -2.12
SHOX2O60902 AC079203.1-201ENST00000487972 404 ntBASIC1.79□□□□□ -2.12
SHOX2O60902 AC007182.2-201ENST00000489251 402 ntBASIC1.79□□□□□ -2.12
SHOX2O60902 RPL9P6-201ENST00000492764 598 ntBASIC1.79□□□□□ -2.12
SHOX2O60902 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SHOX2O60902 RNU6-390P-201ENST00000516259 103 ntBASIC1.79□□□□□ -2.12
SHOX2O60902 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.79□□□□□ -2.12
SHOX2O60902 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.79□□□□□ -2.12
SHOX2O60902 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.79□□□□□ -2.12
SHOX2O60902 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.79□□□□□ -2.12
SHOX2O60902 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.79□□□□□ -2.12
SHOX2O60902 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.79□□□□□ -2.12
SHOX2O60902 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.79□□□□□ -2.12
SHOX2O60902 AP001269.3-201ENST00000588718 329 ntBASIC1.79□□□□□ -2.12
SHOX2O60902 AC091152.3-201ENST00000604227 325 ntBASIC1.79□□□□□ -2.12
SHOX2O60902 AL121652.1-201ENST00000608851 448 ntBASIC1.79□□□□□ -2.12
SHOX2O60902 AC107075.1-201ENST00000613695 314 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms