Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RNU6-358P-201ENST00000516564 75 ntBASIC3.83□□□□□ -1.8
CTNND1O60716 RNU6-928P-201ENST00000516876 104 ntBASIC3.83□□□□□ -1.8
CTNND1O60716 AC011602.1-201ENST00000546484 331 ntBASIC3.83□□□□□ -1.8
CTNND1O60716 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.83□□□□□ -1.8
CTNND1O60716 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CTNND1O60716 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.83□□□□□ -1.8
CTNND1O60716 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.83□□□□□ -1.8
CTNND1O60716 AC010525.2-201ENST00000590920 195 ntBASIC3.83□□□□□ -1.8
CTNND1O60716 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.83□□□□□ -1.8
CTNND1O60716 RMST_3.1-201ENST00000611651 109 ntBASIC3.83□□□□□ -1.8
CTNND1O60716 DUSP12P1-201ENST00000612874 516 ntBASIC3.83□□□□□ -1.8
CTNND1O60716 AL138880.2-201ENST00000616214 239 ntBASIC3.83□□□□□ -1.8
CTNND1O60716 XIST_intron.1-201ENST00000619444 68 ntBASIC3.83□□□□□ -1.8
CTNND1O60716 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.83□□□□□ -1.8
CTNND1O60716 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CTNND1O60716 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CTNND1O60716 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.82□□□□□ -1.8
CTNND1O60716 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTNND1O60716 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTNND1O60716 Y_RNA.33-201ENST00000362591 102 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 RNU1-70P-201ENST00000362618 164 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 SNORA80A-201ENST00000363922 136 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 RNU1-140P-201ENST00000365040 165 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 RNU4-66P-201ENST00000365199 138 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTNND1O60716 RNU6-1127P-201ENST00000384580 107 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 MIR591-201ENST00000385290 95 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 AC126124.2-201ENST00000413542 321 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 AL158071.1-201ENST00000430315 461 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.82□□□□□ -1.8
CTNND1O60716 AC236972.1-201ENST00000433225 199 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 HMGN2P20-201ENST00000437531 273 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.82□□□□□ -1.8
CTNND1O60716 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.82□□□□□ -1.8
CTNND1O60716 MRPS31P2-201ENST00000451581 518 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 RPL12P25-201ENST00000455592 494 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 MTCO3P9-201ENST00000506989 781 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.82□□□□□ -1.8
CTNND1O60716 AL157871.3-201ENST00000557231 293 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 MIR5692A1-201ENST00000580523 69 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 MIR548AC-201ENST00000585049 88 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.82□□□□□ -1.8
CTNND1O60716 AC093732.2-201ENST00000607950 274 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 AC005858.4-201ENST00000623191 700 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 AC006386.2-201ENST00000624491 75 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 AC012005.1-201ENST00000624575 75 ntBASIC3.82□□□□□ -1.8
CTNND1O60716 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.82□□□□□ -1.8
CTNND1O60716 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTNND1O60716 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTNND1O60716 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTNND1O60716 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTNND1O60716 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
CTNND1O60716 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.81□□□□□ -1.8
CTNND1O60716 RNU6-270P-201ENST00000364131 105 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 RNU6-715P-201ENST00000365204 103 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 RNU6-395P-201ENST00000365662 106 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 RNU6-393P-201ENST00000384475 107 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 SNORD70.1-201ENST00000391007 85 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 MIR1289-1-201ENST00000408836 144 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 AL159169.1-201ENST00000421119 127 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.81□□□□□ -1.8
CTNND1O60716 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.81□□□□□ -1.8
CTNND1O60716 MTCO3P18-201ENST00000440206 761 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.81□□□□□ -1.8
CTNND1O60716 RPL21P99-201ENST00000480369 423 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 AC097462.2-201ENST00000504623 481 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 AC116353.2-201ENST00000505332 712 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 AC009901.1-201ENST00000506703 541 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 NDUFB9P3-201ENST00000521269 501 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 AF235103.2-201ENST00000525753 346 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 AP002404.1-201ENST00000532005 451 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.81□□□□□ -1.8
CTNND1O60716 MTCO3P24-201ENST00000572729 782 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 MIR2682-201ENST00000580305 110 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 MIR4513-201ENST00000581077 86 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 uc_338.1-201ENST00000612113 180 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 PLCE1P1-201ENST00000622094 305 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 AC006111.3-201ENST00000622137 383 ntBASIC3.81□□□□□ -1.8
CTNND1O60716 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTNND1O60716 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CTNND1O60716 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTNND1O60716 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.81□□□□□ -1.8
CTNND1O60716 PWAR6-201ENST00000552334 4618 ntBASIC3.8□□□□□ -1.8
CTNND1O60716 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTNND1O60716 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTNND1O60716 RNU4-20P-201ENST00000365601 151 ntBASIC3.8□□□□□ -1.8
CTNND1O60716 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.8□□□□□ -1.8
CTNND1O60716 SNORA7.4-201ENST00000384249 137 ntBASIC3.8□□□□□ -1.8
CTNND1O60716 Y_RNA.500-201ENST00000384466 111 ntBASIC3.8□□□□□ -1.8
CTNND1O60716 SNORA44-201ENST00000384584 132 ntBASIC3.8□□□□□ -1.8
CTNND1O60716 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.8□□□□□ -1.8
CTNND1O60716 RPL5P18-201ENST00000406671 891 ntBASIC3.8□□□□□ -1.8
CTNND1O60716 RNU6-1025P-201ENST00000410629 104 ntBASIC3.8□□□□□ -1.8
CTNND1O60716 RPL21P90-201ENST00000415692 466 ntBASIC3.8□□□□□ -1.8
CTNND1O60716 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.8□□□□□ -1.8
CTNND1O60716 SRIP2-201ENST00000428470 166 ntBASIC3.8□□□□□ -1.8
CTNND1O60716 HMGB1P31-201ENST00000437242 427 ntBASIC3.8□□□□□ -1.8
CTNND1O60716 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.8□□□□□ -1.8
CTNND1O60716 RPS4XP2-201ENST00000458402 793 ntBASIC3.8□□□□□ -1.8
CTNND1O60716 FCF1P3-201ENST00000496394 590 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms