Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GRIN3BO60391 AC000123.3-201ENST00000624029 4975 ntBASIC4.73□□□□□ -1.65
GRIN3BO60391 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
GRIN3BO60391 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.72□□□□□ -1.65
GRIN3BO60391 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GRIN3BO60391 Y_RNA.80-201ENST00000362996 102 ntBASIC4.72□□□□□ -1.65
GRIN3BO60391 Y_RNA.618-201ENST00000410949 107 ntBASIC4.72□□□□□ -1.65
GRIN3BO60391 RPL21P90-201ENST00000415692 466 ntBASIC4.72□□□□□ -1.65
GRIN3BO60391 MTCYBP10-201ENST00000424905 650 ntBASIC4.72□□□□□ -1.65
GRIN3BO60391 SDAD1P3-201ENST00000427380 333 ntBASIC4.72□□□□□ -1.65
GRIN3BO60391 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.72□□□□□ -1.65
GRIN3BO60391 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.72□□□□□ -1.65
GRIN3BO60391 AC092436.3-201ENST00000511788 257 ntBASIC4.72□□□□□ -1.65
GRIN3BO60391 APOOP4-201ENST00000513530 597 ntBASIC4.72□□□□□ -1.65
GRIN3BO60391 RNU6-307P-201ENST00000516743 106 ntBASIC4.72□□□□□ -1.65
GRIN3BO60391 RN7SKP40-201ENST00000517211 242 ntBASIC4.72□□□□□ -1.65
GRIN3BO60391 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.72□□□□□ -1.65
GRIN3BO60391 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.72□□□□□ -1.65
GRIN3BO60391 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.72□□□□□ -1.65
GRIN3BO60391 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.72□□□□□ -1.65
GRIN3BO60391 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.72□□□□□ -1.65
GRIN3BO60391 AC011494.1-201ENST00000596454 237 ntBASIC4.72□□□□□ -1.65
GRIN3BO60391 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.72□□□□□ -1.65
GRIN3BO60391 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GRIN3BO60391 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.72□□□□□ -1.65
GRIN3BO60391 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GRIN3BO60391 AL353743.1-202ENST00000431724 1695 ntBASIC4.72□□□□□ -1.65
GRIN3BO60391 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.72□□□□□ -1.65
GRIN3BO60391 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.72□□□□□ -1.65
GRIN3BO60391 MAPK10-303ENST00000641324 3959 ntBASIC4.72□□□□□ -1.65
GRIN3BO60391 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
GRIN3BO60391 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
GRIN3BO60391 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.72□□□□□ -1.65
GRIN3BO60391 MTND5P27-201ENST00000428871 1720 ntBASIC4.72□□□□□ -1.65
GRIN3BO60391 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.72□□□□□ -1.65
GRIN3BO60391 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
GRIN3BO60391 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
GRIN3BO60391 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
GRIN3BO60391 AC005183.1-201ENST00000603687 1979 ntBASIC4.71□□□□□ -1.66
GRIN3BO60391 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
GRIN3BO60391 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
GRIN3BO60391 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
GRIN3BO60391 RNU6-1303P-201ENST00000364841 107 ntBASIC4.71□□□□□ -1.66
GRIN3BO60391 Y_RNA.364-201ENST00000365532 101 ntBASIC4.71□□□□□ -1.66
GRIN3BO60391 RNU6-26P-201ENST00000383985 107 ntBASIC4.71□□□□□ -1.66
GRIN3BO60391 HDGFP1-201ENST00000405943 252 ntBASIC4.71□□□□□ -1.66
GRIN3BO60391 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
GRIN3BO60391 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.71□□□□□ -1.66
GRIN3BO60391 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.71□□□□□ -1.66
GRIN3BO60391 AL360271.2-201ENST00000447710 161 ntBASIC4.71□□□□□ -1.66
GRIN3BO60391 MTATP8P1-201ENST00000467115 207 ntBASIC4.71□□□□□ -1.66
GRIN3BO60391 AC023141.12-201ENST00000512399 199 ntBASIC4.71□□□□□ -1.66
GRIN3BO60391 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.71□□□□□ -1.66
GRIN3BO60391 RNU6-764P-201ENST00000516396 105 ntBASIC4.71□□□□□ -1.66
GRIN3BO60391 AC100770.1-201ENST00000532310 322 ntBASIC4.71□□□□□ -1.66
GRIN3BO60391 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.71□□□□□ -1.66
GRIN3BO60391 AC005899.2-201ENST00000584353 90 ntBASIC4.71□□□□□ -1.66
GRIN3BO60391 MIR548AC-201ENST00000585049 88 ntBASIC4.71□□□□□ -1.66
GRIN3BO60391 AL137849.1-201ENST00000604767 169 ntBASIC4.71□□□□□ -1.66
GRIN3BO60391 HMGN2P28-201ENST00000606102 262 ntBASIC4.71□□□□□ -1.66
GRIN3BO60391 U4.1-201ENST00000620349 87 ntBASIC4.71□□□□□ -1.66
GRIN3BO60391 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.71□□□□□ -1.66
GRIN3BO60391 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
GRIN3BO60391 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.71□□□□□ -1.66
GRIN3BO60391 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
GRIN3BO60391 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GRIN3BO60391 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GRIN3BO60391 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
GRIN3BO60391 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GRIN3BO60391 RNU6-173P-201ENST00000364215 104 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 RNU1-115P-201ENST00000365329 160 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 RNU6-1329P-201ENST00000365664 107 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
GRIN3BO60391 RNY1P14-201ENST00000384426 108 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 AL139095.1-201ENST00000404326 391 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 AL031121.1-201ENST00000406553 254 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 RNU6-847P-201ENST00000411115 108 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 RNU6-607P-201ENST00000411283 108 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 AC244098.2-201ENST00000422068 99 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.7□□□□□ -1.66
GRIN3BO60391 AL160004.2-201ENST00000432935 350 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 S100A11P2-201ENST00000467589 312 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 AP000926.1-201ENST00000479573 241 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 RPS15AP34-201ENST00000487776 387 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.7□□□□□ -1.66
GRIN3BO60391 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.7□□□□□ -1.66
GRIN3BO60391 Vault.1-201ENST00000516474 102 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GRIN3BO60391 IGLV3-26-201ENST00000520756 302 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.7□□□□□ -1.66
GRIN3BO60391 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.7□□□□□ -1.66
GRIN3BO60391 BNIP3P16-201ENST00000589779 534 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 AC136601.2-201ENST00000604356 474 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 AC007485.1-201ENST00000616755 206 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.7□□□□□ -1.66
GRIN3BO60391 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
GRIN3BO60391 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.7□□□□□ -1.66
GRIN3BO60391 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.7□□□□□ -1.66
GRIN3BO60391 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GRIN3BO60391 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms