Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PROM1O43490 HLFP1-201ENST00000402375 499 ntBASIC3.63□□□□□ -1.83
PROM1O43490 AL590704.1-201ENST00000402856 794 ntBASIC3.63□□□□□ -1.83
PROM1O43490 SNORA3.3-201ENST00000408712 125 ntBASIC3.63□□□□□ -1.83
PROM1O43490 RPS12P24-201ENST00000412619 387 ntBASIC3.63□□□□□ -1.83
PROM1O43490 BX842559.1-201ENST00000419615 532 ntBASIC3.63□□□□□ -1.83
PROM1O43490 AL159169.1-201ENST00000421119 127 ntBASIC3.63□□□□□ -1.83
PROM1O43490 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.63□□□□□ -1.83
PROM1O43490 PRDX3P3-201ENST00000447765 522 ntBASIC3.63□□□□□ -1.83
PROM1O43490 MTCO3P10-201ENST00000455912 772 ntBASIC3.63□□□□□ -1.83
PROM1O43490 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.63□□□□□ -1.83
PROM1O43490 AC117503.1-201ENST00000472241 394 ntBASIC3.63□□□□□ -1.83
PROM1O43490 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.63□□□□□ -1.83
PROM1O43490 MTCYBP40-201ENST00000509390 1135 ntBASIC3.63□□□□□ -1.83
PROM1O43490 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.63□□□□□ -1.83
PROM1O43490 RNU6-1069P-201ENST00000516612 133 ntBASIC3.63□□□□□ -1.83
PROM1O43490 RNU6-1213P-201ENST00000517075 94 ntBASIC3.63□□□□□ -1.83
PROM1O43490 RNU6-1231P-201ENST00000517185 103 ntBASIC3.63□□□□□ -1.83
PROM1O43490 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PROM1O43490 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.63□□□□□ -1.83
PROM1O43490 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.63□□□□□ -1.83
PROM1O43490 FAM60BP-201ENST00000578364 658 ntBASIC3.63□□□□□ -1.83
PROM1O43490 MIR4474-201ENST00000579189 78 ntBASIC3.63□□□□□ -1.83
PROM1O43490 AL355802.3-201ENST00000607571 545 ntBASIC3.63□□□□□ -1.83
PROM1O43490 AC019193.3-201ENST00000609144 554 ntBASIC3.63□□□□□ -1.83
PROM1O43490 AL157817.1-201ENST00000614264 790 ntBASIC3.63□□□□□ -1.83
PROM1O43490 AL110115.1-201ENST00000614396 364 ntBASIC3.63□□□□□ -1.83
PROM1O43490 AC022418.1-201ENST00000624118 445 ntBASIC3.63□□□□□ -1.83
PROM1O43490 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PROM1O43490 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PROM1O43490 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.63□□□□□ -1.83
PROM1O43490 AL161912.2-201ENST00000565707 3007 ntBASIC3.63□□□□□ -1.83
PROM1O43490 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.63□□□□□ -1.83
PROM1O43490 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PROM1O43490 MTND5P10-201ENST00000603719 1809 ntBASIC3.63□□□□□ -1.83
PROM1O43490 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PROM1O43490 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
PROM1O43490 MTND5P19-201ENST00000424872 1794 ntBASIC3.62□□□□□ -1.83
PROM1O43490 Y_RNA.135-201ENST00000363439 95 ntBASIC3.62□□□□□ -1.83
PROM1O43490 RNU6-45P-201ENST00000384471 107 ntBASIC3.62□□□□□ -1.83
PROM1O43490 AL360182.1-201ENST00000397433 468 ntBASIC3.62□□□□□ -1.83
PROM1O43490 AL391417.1-201ENST00000404100 426 ntBASIC3.62□□□□□ -1.83
PROM1O43490 AL139397.2-201ENST00000404529 772 ntBASIC3.62□□□□□ -1.83
PROM1O43490 MTHFD2P2-201ENST00000407725 247 ntBASIC3.62□□□□□ -1.83
PROM1O43490 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.62□□□□□ -1.83
PROM1O43490 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.62□□□□□ -1.83
PROM1O43490 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.62□□□□□ -1.83
PROM1O43490 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.62□□□□□ -1.83
PROM1O43490 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.62□□□□□ -1.83
PROM1O43490 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.62□□□□□ -1.83
PROM1O43490 MIR2053-201ENST00000459295 91 ntBASIC3.62□□□□□ -1.83
PROM1O43490 RPL37P6-201ENST00000460682 294 ntBASIC3.62□□□□□ -1.83
PROM1O43490 AC087884.1-201ENST00000469738 328 ntBASIC3.62□□□□□ -1.83
PROM1O43490 AC084198.1-201ENST00000477747 402 ntBASIC3.62□□□□□ -1.83
PROM1O43490 AL049874.1-201ENST00000489560 388 ntBASIC3.62□□□□□ -1.83
PROM1O43490 AC104136.1-201ENST00000512969 394 ntBASIC3.62□□□□□ -1.83
PROM1O43490 SNORA31.8-201ENST00000516327 108 ntBASIC3.62□□□□□ -1.83
PROM1O43490 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.62□□□□□ -1.83
PROM1O43490 RANP9-201ENST00000519957 271 ntBASIC3.62□□□□□ -1.83
PROM1O43490 AP000889.1-201ENST00000530968 660 ntBASIC3.62□□□□□ -1.83
PROM1O43490 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.62□□□□□ -1.83
PROM1O43490 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.62□□□□□ -1.83
PROM1O43490 SNRPGP18-201ENST00000553000 214 ntBASIC3.62□□□□□ -1.83
PROM1O43490 AC012119.1-201ENST00000603184 222 ntBASIC3.62□□□□□ -1.83
PROM1O43490 SNORA51-201ENST00000606420 132 ntBASIC3.62□□□□□ -1.83
PROM1O43490 MIR15A-201ENST00000607334 83 ntBASIC3.62□□□□□ -1.83
PROM1O43490 AL669831.3-213ENST00000636676 183 ntBASIC3.62□□□□□ -1.83
PROM1O43490 AC009812.4-201ENST00000569134 1805 ntBASIC3.62□□□□□ -1.83
PROM1O43490 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
PROM1O43490 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PROM1O43490 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PROM1O43490 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PROM1O43490 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PROM1O43490 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PROM1O43490 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.61□□□□□ -1.83
PROM1O43490 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PROM1O43490 Y_RNA.31-201ENST00000362574 102 ntBASIC3.61□□□□□ -1.83
PROM1O43490 SNORA22B-201ENST00000383876 138 ntBASIC3.61□□□□□ -1.83
PROM1O43490 SNORA36C-201ENST00000384289 132 ntBASIC3.61□□□□□ -1.83
PROM1O43490 RNU6-954P-201ENST00000411355 107 ntBASIC3.61□□□□□ -1.83
PROM1O43490 AC093578.1-201ENST00000415219 368 ntBASIC3.61□□□□□ -1.83
PROM1O43490 RPL31P12-201ENST00000422587 358 ntBASIC3.61□□□□□ -1.83
PROM1O43490 AL590632.1-201ENST00000424289 371 ntBASIC3.61□□□□□ -1.83
PROM1O43490 RPL23AP69-201ENST00000431134 458 ntBASIC3.61□□□□□ -1.83
PROM1O43490 SSXP4-201ENST00000451349 245 ntBASIC3.61□□□□□ -1.83
PROM1O43490 HSPE1P6-201ENST00000479457 291 ntBASIC3.61□□□□□ -1.83
PROM1O43490 AC108860.1-201ENST00000484521 383 ntBASIC3.61□□□□□ -1.83
PROM1O43490 RN7SL323P-201ENST00000494712 295 ntBASIC3.61□□□□□ -1.83
PROM1O43490 RNU1-54P-201ENST00000517181 120 ntBASIC3.61□□□□□ -1.83
PROM1O43490 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.61□□□□□ -1.83
PROM1O43490 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.61□□□□□ -1.83
PROM1O43490 CYCSP30-201ENST00000546447 172 ntBASIC3.61□□□□□ -1.83
PROM1O43490 AC025423.5-201ENST00000550230 219 ntBASIC3.61□□□□□ -1.83
PROM1O43490 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.61□□□□□ -1.83
PROM1O43490 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
PROM1O43490 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.61□□□□□ -1.83
PROM1O43490 AC008737.2-201ENST00000599446 118 ntBASIC3.61□□□□□ -1.83
PROM1O43490 AL137849.1-201ENST00000604767 169 ntBASIC3.61□□□□□ -1.83
PROM1O43490 AC012468.1-201ENST00000604888 430 ntBASIC3.61□□□□□ -1.83
PROM1O43490 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms