Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
MSI1O43347 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
MSI1O43347 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
MSI1O43347 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
MSI1O43347 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.33□□□□□ -1.88
MSI1O43347 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MSI1O43347 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
MSI1O43347 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MSI1O43347 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MSI1O43347 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.33□□□□□ -1.88
MSI1O43347 UBE2L2-201ENST00000254302 429 ntBASIC3.33□□□□□ -1.88
MSI1O43347 U3.12-201ENST00000364498 214 ntBASIC3.33□□□□□ -1.88
MSI1O43347 Y_RNA.378-201ENST00000365652 113 ntBASIC3.33□□□□□ -1.88
MSI1O43347 RNU6-767P-201ENST00000384132 107 ntBASIC3.33□□□□□ -1.88
MSI1O43347 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MSI1O43347 AL139039.1-201ENST00000401900 692 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AL592114.1-201ENST00000403842 483 ntBASIC3.33□□□□□ -1.88
MSI1O43347 MIR1290-201ENST00000408735 78 ntBASIC3.33□□□□□ -1.88
MSI1O43347 U3.42-201ENST00000408746 214 ntBASIC3.33□□□□□ -1.88
MSI1O43347 RNU2-41P-201ENST00000410991 178 ntBASIC3.33□□□□□ -1.88
MSI1O43347 BTF3L4P3-201ENST00000418879 476 ntBASIC3.33□□□□□ -1.88
MSI1O43347 PDCL2P1-201ENST00000419302 352 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AL645937.1-202ENST00000421799 937 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AL353678.1-201ENST00000422735 741 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AL160275.3-201ENST00000423876 471 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AC236972.1-201ENST00000433225 199 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.33□□□□□ -1.88
MSI1O43347 RPS24P13-201ENST00000442520 397 ntBASIC3.33□□□□□ -1.88
MSI1O43347 RPS15AP27-201ENST00000449183 343 ntBASIC3.33□□□□□ -1.88
MSI1O43347 RPS20P22-201ENST00000473700 357 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AC109925.1-201ENST00000478069 331 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AP001086.1-201ENST00000494882 321 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.33□□□□□ -1.88
MSI1O43347 SUMO2P6-201ENST00000505273 288 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AC112206.3-201ENST00000514578 389 ntBASIC3.33□□□□□ -1.88
MSI1O43347 LRRC34P2-201ENST00000514850 553 ntBASIC3.33□□□□□ -1.88
MSI1O43347 RNU2-58P-201ENST00000516403 183 ntBASIC3.33□□□□□ -1.88
MSI1O43347 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.33□□□□□ -1.88
MSI1O43347 RPL7P20-201ENST00000520308 745 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AC068657.1-201ENST00000520807 306 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.33□□□□□ -1.88
MSI1O43347 AC107953.1-201ENST00000522216 297 ntBASIC3.33□□□□□ -1.88
MSI1O43347 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.33□□□□□ -1.88
MSI1O43347 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.33□□□□□ -1.88
MSI1O43347 AC011712.1-201ENST00000588959 234 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AC012493.2-201ENST00000595083 291 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AL161798.1-201ENST00000604630 131 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AC021646.1-201ENST00000605469 484 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AC092807.2-201ENST00000609367 243 ntBASIC3.33□□□□□ -1.88
MSI1O43347 uc_338.25-201ENST00000613756 156 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AC063943.3-201ENST00000615562 356 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AC104985.2-201ENST00000620598 500 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AP003400.5-201ENST00000624827 617 ntBASIC3.33□□□□□ -1.88
MSI1O43347 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.33□□□□□ -1.88
MSI1O43347 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MSI1O43347 MTND4P35-201ENST00000604257 1375 ntBASIC3.33□□□□□ -1.88
MSI1O43347 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.33□□□□□ -1.88
MSI1O43347 AC007496.3-201ENST00000624987 3443 ntBASIC3.33□□□□□ -1.88
MSI1O43347 AC005183.1-201ENST00000603687 1979 ntBASIC3.32□□□□□ -1.88
MSI1O43347 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.32□□□□□ -1.88
MSI1O43347 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
MSI1O43347 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
MSI1O43347 RNU6-1167P-201ENST00000363227 94 ntBASIC3.32□□□□□ -1.88
MSI1O43347 RNU6-512P-201ENST00000364438 103 ntBASIC3.32□□□□□ -1.88
MSI1O43347 MIR493-201ENST00000385254 89 ntBASIC3.32□□□□□ -1.88
MSI1O43347 RAP1BP3-201ENST00000407180 549 ntBASIC3.32□□□□□ -1.88
MSI1O43347 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.32□□□□□ -1.88
MSI1O43347 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
MSI1O43347 RNU4-26P-201ENST00000410270 107 ntBASIC3.32□□□□□ -1.88
MSI1O43347 RNA5SP111-201ENST00000411386 101 ntBASIC3.32□□□□□ -1.88
MSI1O43347 RNU2-71P-201ENST00000411395 189 ntBASIC3.32□□□□□ -1.88
MSI1O43347 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.32□□□□□ -1.88
MSI1O43347 AC080125.1-201ENST00000414888 684 ntBASIC3.32□□□□□ -1.88
MSI1O43347 AL669831.1-202ENST00000428504 417 ntBASIC3.32□□□□□ -1.88
MSI1O43347 AL592045.1-201ENST00000429867 352 ntBASIC3.32□□□□□ -1.88
MSI1O43347 AL353705.1-201ENST00000433468 480 ntBASIC3.32□□□□□ -1.88
MSI1O43347 GTF2IP13-201ENST00000438487 386 ntBASIC3.32□□□□□ -1.88
MSI1O43347 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.32□□□□□ -1.88
MSI1O43347 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.32□□□□□ -1.88
MSI1O43347 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.32□□□□□ -1.88
MSI1O43347 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.32□□□□□ -1.88
MSI1O43347 SCARNA18-201ENST00000459004 134 ntBASIC3.32□□□□□ -1.88
MSI1O43347 RNU6-1208P-201ENST00000459588 107 ntBASIC3.32□□□□□ -1.88
MSI1O43347 RPL9P32-201ENST00000464118 620 ntBASIC3.32□□□□□ -1.88
MSI1O43347 AC012181.1-201ENST00000479895 423 ntBASIC3.32□□□□□ -1.88
MSI1O43347 AC006445.1-201ENST00000491925 405 ntBASIC3.32□□□□□ -1.88
MSI1O43347 AC009901.1-201ENST00000506703 541 ntBASIC3.32□□□□□ -1.88
MSI1O43347 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.32□□□□□ -1.88
MSI1O43347 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.32□□□□□ -1.88
MSI1O43347 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.32□□□□□ -1.88
MSI1O43347 AC090136.1-201ENST00000520009 240 ntBASIC3.32□□□□□ -1.88
MSI1O43347 MIR5004-201ENST00000579078 107 ntBASIC3.32□□□□□ -1.88
MSI1O43347 BNIP3P25-201ENST00000596023 559 ntBASIC3.32□□□□□ -1.88
MSI1O43347 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.32□□□□□ -1.88
MSI1O43347 AC009570.1-201ENST00000609599 745 ntBASIC3.32□□□□□ -1.88
MSI1O43347 AC006023.2-201ENST00000609916 167 ntBASIC3.32□□□□□ -1.88
MSI1O43347 AC009248.2-201ENST00000619826 254 ntBASIC3.32□□□□□ -1.88
MSI1O43347 MIR8057-201ENST00000620957 69 ntBASIC3.32□□□□□ -1.88
MSI1O43347 AC091903.1-201ENST00000624322 454 ntBASIC3.32□□□□□ -1.88
MSI1O43347 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms