Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC007038.2-201ENST00000608095 740 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.24□□□□□ -2.21
SDCBPO00560 AL356094.1-201ENST00000624663 1212 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SDCBPO00560 AC006927.2-201ENST00000639256 389 ntBASIC1.24□□□□□ -2.21
SDCBPO00560 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SDCBPO00560 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SDCBPO00560 AL161781.1-201ENST00000354277 403 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 RNU6-236P-201ENST00000363886 106 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 snoZ40.1-201ENST00000364540 72 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 RNU6-658P-201ENST00000384606 106 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
SDCBPO00560 OR9R1P-201ENST00000412200 877 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 VN1R108P-201ENST00000431580 830 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 AL121890.1-201ENST00000435457 205 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.23□□□□□ -2.21
SDCBPO00560 MTND4P6-201ENST00000438297 472 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.23□□□□□ -2.21
SDCBPO00560 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.23□□□□□ -2.21
SDCBPO00560 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.23□□□□□ -2.21
SDCBPO00560 FABP5P15-201ENST00000453566 214 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.23□□□□□ -2.21
SDCBPO00560 AC013267.1-201ENST00000458227 267 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 AC087884.1-201ENST00000469738 328 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 AC010631.1-201ENST00000474150 156 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.23□□□□□ -2.21
SDCBPO00560 MTCO3P27-201ENST00000514397 196 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 SNORA4.4-201ENST00000515921 135 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 RNA5SP112-201ENST00000515937 99 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 RNU6-581P-201ENST00000516214 105 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 SNORA31.24-201ENST00000517232 57 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.23□□□□□ -2.21
SDCBPO00560 AP003355.1-201ENST00000518956 587 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.23□□□□□ -2.21
SDCBPO00560 DEFB130C-202ENST00000530001 230 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SDCBPO00560 AC090079.2-201ENST00000575289 768 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SDCBPO00560 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.23□□□□□ -2.21
SDCBPO00560 DUSP12P1-201ENST00000612874 516 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 AL158163.2-201ENST00000619110 700 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SDCBPO00560 CDC27P3-201ENST00000635418 1910 ntBASIC1.23□□□□□ -2.21
SDCBPO00560 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SDCBPO00560 RNU6-432P-201ENST00000384196 109 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 RNU6-19P-201ENST00000384718 107 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 MTCO1P56-201ENST00000401674 224 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 NDUFS5P1-201ENST00000405668 289 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 RNU2-63P-201ENST00000410792 194 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 RNU2-68P-201ENST00000410878 191 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 RPS24P7-201ENST00000416921 246 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 AC074117.2-201ENST00000417130 397 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.22□□□□□ -2.21
SDCBPO00560 USP9YP26-201ENST00000421008 661 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 MRPS36P1-201ENST00000421291 307 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.22□□□□□ -2.21
SDCBPO00560 AL354695.1-201ENST00000427935 228 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.22□□□□□ -2.21
SDCBPO00560 NANOGP2-201ENST00000435391 727 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 MTND6P13-201ENST00000443510 523 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.22□□□□□ -2.21
SDCBPO00560 MTND1P9-201ENST00000453775 944 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.22□□□□□ -2.21
SDCBPO00560 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.22□□□□□ -2.21
SDCBPO00560 AC011005.2-201ENST00000487324 359 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 AC018868.1-201ENST00000491307 315 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 HMGB1P35-201ENST00000503360 598 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.22□□□□□ -2.21
SDCBPO00560 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.22□□□□□ -2.21
SDCBPO00560 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SDCBPO00560 RNU6-150P-201ENST00000516237 95 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.22□□□□□ -2.21
SDCBPO00560 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.22□□□□□ -2.21
SDCBPO00560 AC015720.1-201ENST00000565251 277 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 AL078605.1-201ENST00000603529 500 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 AF129408.1-201ENST00000608767 431 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 AC009237.15-201ENST00000610252 501 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SDCBPO00560 AC109454.4-201ENST00000623411 649 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 AC131280.1-202ENST00000624067 4211 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.22□□□□□ -2.21
SDCBPO00560 Z75746.1-201ENST00000440243 2080 ntBASIC1.22□□□□□ -2.21
SDCBPO00560 RNU6-777P-201ENST00000364265 104 ntBASIC1.21□□□□□ -2.22
SDCBPO00560 RNU6-744P-201ENST00000365557 107 ntBASIC1.21□□□□□ -2.22
SDCBPO00560 RNU6-1316P-201ENST00000384242 108 ntBASIC1.21□□□□□ -2.22
SDCBPO00560 AL591034.2-201ENST00000402839 359 ntBASIC1.21□□□□□ -2.22
SDCBPO00560 RNU6-955P-201ENST00000410497 104 ntBASIC1.21□□□□□ -2.22
SDCBPO00560 MTND1P21-201ENST00000412991 285 ntBASIC1.21□□□□□ -2.22
SDCBPO00560 AC244636.1-201ENST00000421152 228 ntBASIC1.21□□□□□ -2.22
SDCBPO00560 PTGES3P4-201ENST00000426243 356 ntBASIC1.21□□□□□ -2.22
SDCBPO00560 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.21□□□□□ -2.22
SDCBPO00560 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.21□□□□□ -2.22
SDCBPO00560 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.21□□□□□ -2.22
SDCBPO00560 OR6C5P-201ENST00000452388 923 ntBASIC1.21□□□□□ -2.22
SDCBPO00560 AC092001.1-201ENST00000453012 261 ntBASIC1.21□□□□□ -2.22
SDCBPO00560 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.21□□□□□ -2.22
SDCBPO00560 RNU1-98P-201ENST00000458992 160 ntBASIC1.21□□□□□ -2.22
SDCBPO00560 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms