Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AL512643.1-201ENST00000635735 524 ntBASIC1.6□□□□□ -2.15
UPK2O00526 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.6□□□□□ -2.15
UPK2O00526 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.6□□□□□ -2.15
UPK2O00526 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.6□□□□□ -2.15
UPK2O00526 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
UPK2O00526 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.6□□□□□ -2.15
UPK2O00526 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
UPK2O00526 RNU4-68P-201ENST00000364314 141 ntBASIC1.59□□□□□ -2.15
UPK2O00526 U3.13-201ENST00000364804 214 ntBASIC1.59□□□□□ -2.15
UPK2O00526 XGY1-201ENST00000381172 446 ntBASIC1.59□□□□□ -2.15
UPK2O00526 AL023284.1-201ENST00000403956 276 ntBASIC1.59□□□□□ -2.15
UPK2O00526 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.59□□□□□ -2.15
UPK2O00526 RN7SKP32-201ENST00000410167 303 ntBASIC1.59□□□□□ -2.15
UPK2O00526 RPS12P24-201ENST00000412619 387 ntBASIC1.59□□□□□ -2.15
UPK2O00526 AL135786.1-201ENST00000415892 214 ntBASIC1.59□□□□□ -2.15
UPK2O00526 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.59□□□□□ -2.15
UPK2O00526 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.59□□□□□ -2.15
UPK2O00526 AL161788.1-201ENST00000441805 169 ntBASIC1.59□□□□□ -2.15
UPK2O00526 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.59□□□□□ -2.15
UPK2O00526 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.59□□□□□ -2.15
UPK2O00526 RPL39P36-201ENST00000490784 156 ntBASIC1.59□□□□□ -2.15
UPK2O00526 RNA5SP364-201ENST00000516938 78 ntBASIC1.59□□□□□ -2.15
UPK2O00526 RNU6-143P-201ENST00000516942 93 ntBASIC1.59□□□□□ -2.15
UPK2O00526 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.59□□□□□ -2.15
UPK2O00526 AP002770.2-201ENST00000543613 532 ntBASIC1.59□□□□□ -2.15
UPK2O00526 AC079598.5-201ENST00000547460 117 ntBASIC1.59□□□□□ -2.15
UPK2O00526 AL512310.1-201ENST00000548639 172 ntBASIC1.59□□□□□ -2.15
UPK2O00526 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.59□□□□□ -2.15
UPK2O00526 MIR4529-201ENST00000578110 78 ntBASIC1.59□□□□□ -2.15
UPK2O00526 MIR4672-201ENST00000583126 81 ntBASIC1.59□□□□□ -2.15
UPK2O00526 MIR4448-201ENST00000584360 86 ntBASIC1.59□□□□□ -2.15
UPK2O00526 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.59□□□□□ -2.15
UPK2O00526 AL031274.2-201ENST00000599419 203 ntBASIC1.59□□□□□ -2.15
UPK2O00526 AL713866.2-201ENST00000603579 219 ntBASIC1.59□□□□□ -2.15
UPK2O00526 APOOP1-201ENST00000604695 592 ntBASIC1.59□□□□□ -2.15
UPK2O00526 AC091965.4-201ENST00000607691 587 ntBASIC1.59□□□□□ -2.15
UPK2O00526 AL391813.2-201ENST00000609113 322 ntBASIC1.59□□□□□ -2.15
UPK2O00526 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.59□□□□□ -2.15
UPK2O00526 AC098657.3-201ENST00000620434 263 ntBASIC1.59□□□□□ -2.15
UPK2O00526 AL589994.2-201ENST00000621124 579 ntBASIC1.59□□□□□ -2.15
UPK2O00526 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.59□□□□□ -2.15
UPK2O00526 MIR219B-201ENST00000637023 88 ntBASIC1.59□□□□□ -2.15
UPK2O00526 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.59□□□□□ -2.15
UPK2O00526 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
UPK2O00526 ZNF702P-202ENST00000434269 1966 ntBASIC1.59□□□□□ -2.16
UPK2O00526 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
UPK2O00526 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.58□□□□□ -2.16
UPK2O00526 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
UPK2O00526 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.58□□□□□ -2.16
UPK2O00526 RNU1-23P-201ENST00000363361 144 ntBASIC1.58□□□□□ -2.16
UPK2O00526 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.58□□□□□ -2.16
UPK2O00526 SNORA67.3-201ENST00000384366 140 ntBASIC1.58□□□□□ -2.16
UPK2O00526 SNORA64-201ENST00000384674 134 ntBASIC1.58□□□□□ -2.16
UPK2O00526 HMGN2P39-201ENST00000398005 273 ntBASIC1.58□□□□□ -2.16
UPK2O00526 SUMO2P12-201ENST00000405924 140 ntBASIC1.58□□□□□ -2.16
UPK2O00526 MIR1305-201ENST00000408300 86 ntBASIC1.58□□□□□ -2.16
UPK2O00526 TIMM9P1-201ENST00000436122 256 ntBASIC1.58□□□□□ -2.16
UPK2O00526 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.58□□□□□ -2.16
UPK2O00526 RPL7P36-201ENST00000444633 681 ntBASIC1.58□□□□□ -2.16
UPK2O00526 PTENP1-201ENST00000447117 1215 ntBASIC1.58□□□□□ -2.16
UPK2O00526 FABP5P13-201ENST00000452144 328 ntBASIC1.58□□□□□ -2.16
UPK2O00526 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.58□□□□□ -2.16
UPK2O00526 AC108059.3-201ENST00000456388 214 ntBASIC1.58□□□□□ -2.16
UPK2O00526 USP9YP25-201ENST00000457708 443 ntBASIC1.58□□□□□ -2.16
UPK2O00526 MTND1P3-201ENST00000484956 952 ntBASIC1.58□□□□□ -2.16
UPK2O00526 AC018437.1-201ENST00000492214 406 ntBASIC1.58□□□□□ -2.16
UPK2O00526 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.58□□□□□ -2.16
UPK2O00526 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.58□□□□□ -2.16
UPK2O00526 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.58□□□□□ -2.16
UPK2O00526 SNORA31.19-201ENST00000517079 126 ntBASIC1.58□□□□□ -2.16
UPK2O00526 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.58□□□□□ -2.16
UPK2O00526 FAM92A1P1-201ENST00000528023 890 ntBASIC1.58□□□□□ -2.16
UPK2O00526 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.58□□□□□ -2.16
UPK2O00526 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.58□□□□□ -2.16
UPK2O00526 LINC00933-203ENST00000559812 219 ntBASIC1.58□□□□□ -2.16
UPK2O00526 AC025678.1-201ENST00000567861 338 ntBASIC1.58□□□□□ -2.16
UPK2O00526 MIR1273D-201ENST00000577266 86 ntBASIC1.58□□□□□ -2.16
UPK2O00526 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.58□□□□□ -2.16
UPK2O00526 NDUFA8P1-201ENST00000605525 367 ntBASIC1.58□□□□□ -2.16
UPK2O00526 AC009974.1-201ENST00000608881 455 ntBASIC1.58□□□□□ -2.16
UPK2O00526 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.58□□□□□ -2.16
UPK2O00526 AC138627.2-201ENST00000624202 601 ntBASIC1.58□□□□□ -2.16
UPK2O00526 AP003400.5-201ENST00000624827 617 ntBASIC1.58□□□□□ -2.16
UPK2O00526 IGHVIII-44-202ENST00000636235 289 ntBASIC1.58□□□□□ -2.16
UPK2O00526 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
UPK2O00526 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.58□□□□□ -2.16
UPK2O00526 KPNA2P1-201ENST00000458289 1591 ntBASIC1.57□□□□□ -2.16
UPK2O00526 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.57□□□□□ -2.16
UPK2O00526 RNU4-82P-201ENST00000362443 140 ntBASIC1.57□□□□□ -2.16
UPK2O00526 RNU6-1159P-201ENST00000362933 107 ntBASIC1.57□□□□□ -2.16
UPK2O00526 MIR518D-201ENST00000385014 87 ntBASIC1.57□□□□□ -2.16
UPK2O00526 MIR1302-8-201ENST00000408342 128 ntBASIC1.57□□□□□ -2.16
UPK2O00526 RNU6-757P-201ENST00000410334 100 ntBASIC1.57□□□□□ -2.16
UPK2O00526 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK2O00526 AL353621.1-201ENST00000418219 243 ntBASIC1.57□□□□□ -2.16
UPK2O00526 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.57□□□□□ -2.16
UPK2O00526 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK2O00526 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK2O00526 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK2O00526 UBE2FP3-201ENST00000436366 524 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms