Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC004941.2-201ENST00000427009 228 ntBASIC0.67□□□□□ -2.3
HMGN4O00479 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.67□□□□□ -2.3
HMGN4O00479 AL691517.1-201ENST00000440833 1235 ntBASIC0.67□□□□□ -2.3
HMGN4O00479 AC245517.4-201ENST00000448601 281 ntBASIC0.67□□□□□ -2.3
HMGN4O00479 AC112492.4-201ENST00000456549 352 ntBASIC0.67□□□□□ -2.3
HMGN4O00479 AC018868.1-201ENST00000491307 315 ntBASIC0.67□□□□□ -2.3
HMGN4O00479 AC018437.1-201ENST00000492214 406 ntBASIC0.67□□□□□ -2.3
HMGN4O00479 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.67□□□□□ -2.3
HMGN4O00479 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.67□□□□□ -2.3
HMGN4O00479 AC112198.4-201ENST00000515450 351 ntBASIC0.67□□□□□ -2.3
HMGN4O00479 AP003034.1-201ENST00000534621 422 ntBASIC0.67□□□□□ -2.3
HMGN4O00479 AC005832.3-201ENST00000537929 631 ntBASIC0.67□□□□□ -2.3
HMGN4O00479 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.67□□□□□ -2.3
HMGN4O00479 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.67□□□□□ -2.3
HMGN4O00479 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.67□□□□□ -2.3
HMGN4O00479 AL671309.1-201ENST00000603750 544 ntBASIC0.67□□□□□ -2.3
HMGN4O00479 AC010900.2-201ENST00000604508 210 ntBASIC0.67□□□□□ -2.3
HMGN4O00479 AC079610.2-201ENST00000604818 690 ntBASIC0.67□□□□□ -2.3
HMGN4O00479 AC211469.2-201ENST00000605461 205 ntBASIC0.67□□□□□ -2.3
HMGN4O00479 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.67□□□□□ -2.3
HMGN4O00479 AL512506.2-201ENST00000624472 458 ntBASIC0.67□□□□□ -2.3
HMGN4O00479 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.67□□□□□ -2.3
HMGN4O00479 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
HMGN4O00479 Y_RNA.338-201ENST00000365320 114 ntBASIC0.66□□□□□ -2.3
HMGN4O00479 RNU6-152P-201ENST00000384037 107 ntBASIC0.66□□□□□ -2.3
HMGN4O00479 SNORA70.7-201ENST00000384159 133 ntBASIC0.66□□□□□ -2.3
HMGN4O00479 RNU2-15P-201ENST00000410692 191 ntBASIC0.66□□□□□ -2.3
HMGN4O00479 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.66□□□□□ -2.3
HMGN4O00479 CR769776.1-201ENST00000441254 787 ntBASIC0.66□□□□□ -2.3
HMGN4O00479 FCF1P6-201ENST00000456841 595 ntBASIC0.66□□□□□ -2.3
HMGN4O00479 RNU6-775P-201ENST00000459318 96 ntBASIC0.66□□□□□ -2.3
HMGN4O00479 RNA5SP102-201ENST00000516865 106 ntBASIC0.66□□□□□ -2.3
HMGN4O00479 SNORD19.2-201ENST00000516978 73 ntBASIC0.66□□□□□ -2.3
HMGN4O00479 SNORA31.22-201ENST00000517204 135 ntBASIC0.66□□□□□ -2.3
HMGN4O00479 AC008015.1-201ENST00000555505 465 ntBASIC0.66□□□□□ -2.3
HMGN4O00479 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.66□□□□□ -2.3
HMGN4O00479 RN7SL622P-201ENST00000585292 275 ntBASIC0.66□□□□□ -2.3
HMGN4O00479 SNRPGP17-201ENST00000603780 214 ntBASIC0.66□□□□□ -2.3
HMGN4O00479 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
HMGN4O00479 AL359314.1-201ENST00000616913 261 ntBASIC0.66□□□□□ -2.3
HMGN4O00479 TEX21P-201ENST00000447107 1476 ntBASIC0.66□□□□□ -2.3
HMGN4O00479 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.65□□□□□ -2.31
HMGN4O00479 AC018630.2-201ENST00000534866 2403 ntBASIC0.65□□□□□ -2.31
HMGN4O00479 RNY1P10-201ENST00000363268 113 ntBASIC0.65□□□□□ -2.31
HMGN4O00479 RNU6-1339P-201ENST00000363574 91 ntBASIC0.65□□□□□ -2.31
HMGN4O00479 AL109755.1-201ENST00000401791 649 ntBASIC0.65□□□□□ -2.31
HMGN4O00479 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.65□□□□□ -2.31
HMGN4O00479 ZYG11AP1-201ENST00000430329 837 ntBASIC0.65□□□□□ -2.31
HMGN4O00479 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.65□□□□□ -2.31
HMGN4O00479 MTCO1P53-201ENST00000441633 699 ntBASIC0.65□□□□□ -2.31
HMGN4O00479 AC017099.1-201ENST00000448261 1028 ntBASIC0.65□□□□□ -2.31
HMGN4O00479 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.65□□□□□ -2.31
HMGN4O00479 RPS27AP10-201ENST00000496103 208 ntBASIC0.65□□□□□ -2.31
HMGN4O00479 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.65□□□□□ -2.31
HMGN4O00479 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.65□□□□□ -2.31
HMGN4O00479 SMURF2P1-201ENST00000514992 481 ntBASIC0.65□□□□□ -2.31
HMGN4O00479 SNORA48.11-201ENST00000517015 89 ntBASIC0.65□□□□□ -2.31
HMGN4O00479 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.65□□□□□ -2.31
HMGN4O00479 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.65□□□□□ -2.31
HMGN4O00479 AC009268.1-201ENST00000561352 1203 ntBASIC0.65□□□□□ -2.31
HMGN4O00479 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC0.65□□□□□ -2.31
HMGN4O00479 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC0.65□□□□□ -2.31
HMGN4O00479 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC0.65□□□□□ -2.31
HMGN4O00479 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.65□□□□□ -2.31
HMGN4O00479 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.65□□□□□ -2.31
HMGN4O00479 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.65□□□□□ -2.31
HMGN4O00479 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.65□□□□□ -2.31
HMGN4O00479 SNORD39.3-201ENST00000584451 71 ntBASIC0.65□□□□□ -2.31
HMGN4O00479 AC008945.2-201ENST00000606056 604 ntBASIC0.65□□□□□ -2.31
HMGN4O00479 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
HMGN4O00479 MIR8074-201ENST00000615081 81 ntBASIC0.65□□□□□ -2.31
HMGN4O00479 AL391597.1-201ENST00000618707 694 ntBASIC0.65□□□□□ -2.31
HMGN4O00479 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
HMGN4O00479 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
HMGN4O00479 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
HMGN4O00479 RNU1-93P-201ENST00000364704 169 ntBASIC0.64□□□□□ -2.31
HMGN4O00479 RNU6-673P-201ENST00000365084 104 ntBASIC0.64□□□□□ -2.31
HMGN4O00479 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
HMGN4O00479 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
HMGN4O00479 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
HMGN4O00479 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.64□□□□□ -2.31
HMGN4O00479 C1DP1-201ENST00000426049 402 ntBASIC0.64□□□□□ -2.31
HMGN4O00479 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
HMGN4O00479 RPS15AP17-201ENST00000470598 390 ntBASIC0.64□□□□□ -2.31
HMGN4O00479 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.64□□□□□ -2.31
HMGN4O00479 AF131216.2-201ENST00000512316 564 ntBASIC0.64□□□□□ -2.31
HMGN4O00479 RNU6-1053P-201ENST00000515930 101 ntBASIC0.64□□□□□ -2.31
HMGN4O00479 RNA5SP291-201ENST00000517222 105 ntBASIC0.64□□□□□ -2.31
HMGN4O00479 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.64□□□□□ -2.31
HMGN4O00479 AC006199.1-201ENST00000548728 219 ntBASIC0.64□□□□□ -2.31
HMGN4O00479 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.64□□□□□ -2.31
HMGN4O00479 AC027104.1-201ENST00000563702 681 ntBASIC0.64□□□□□ -2.31
HMGN4O00479 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
HMGN4O00479 MIR3199-2-201ENST00000636243 86 ntBASIC0.64□□□□□ -2.31
HMGN4O00479 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
HMGN4O00479 ENSAP3-201ENST00000312710 333 ntBASIC0.63□□□□□ -2.31
HMGN4O00479 RNU6-1032P-201ENST00000384100 107 ntBASIC0.63□□□□□ -2.31
HMGN4O00479 MIR29C-201ENST00000385231 88 ntBASIC0.63□□□□□ -2.31
HMGN4O00479 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
HMGN4O00479 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms