Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.86□□□□□ -1.95
O00370 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.86□□□□□ -1.95
O00370 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.86□□□□□ -1.95
O00370 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.86□□□□□ -1.95
O00370 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
O00370 AC135279.1-201ENST00000543493 504 ntBASIC2.86□□□□□ -1.95
O00370 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.86□□□□□ -1.95
O00370 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.86□□□□□ -1.95
O00370 TRAV28-201ENST00000557548 323 ntBASIC2.86□□□□□ -1.95
O00370 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.86□□□□□ -1.95
O00370 AC012557.2-201ENST00000605919 418 ntBASIC2.86□□□□□ -1.95
O00370 MIR7106-201ENST00000612419 65 ntBASIC2.86□□□□□ -1.95
O00370 AC130324.3-201ENST00000614165 542 ntBASIC2.86□□□□□ -1.95
O00370 AC138649.3-201ENST00000622154 254 ntBASIC2.86□□□□□ -1.95
O00370 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
O00370 AC073343.1-201ENST00000328239 651 ntBASIC2.85□□□□□ -1.95
O00370 RNU6-181P-201ENST00000363225 107 ntBASIC2.85□□□□□ -1.95
O00370 RNU6-1167P-201ENST00000363227 94 ntBASIC2.85□□□□□ -1.95
O00370 Y_RNA.245-201ENST00000364493 95 ntBASIC2.85□□□□□ -1.95
O00370 RNU6-7-201ENST00000364784 107 ntBASIC2.85□□□□□ -1.95
O00370 RNU6-8-201ENST00000365467 107 ntBASIC2.85□□□□□ -1.95
O00370 AL356057.3-201ENST00000402607 340 ntBASIC2.85□□□□□ -1.95
O00370 AL356057.2-201ENST00000403318 432 ntBASIC2.85□□□□□ -1.95
O00370 RNU2-9P-201ENST00000410194 145 ntBASIC2.85□□□□□ -1.95
O00370 RNU2-66P-201ENST00000410650 161 ntBASIC2.85□□□□□ -1.95
O00370 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.85□□□□□ -1.95
O00370 MTCO3P41-201ENST00000414801 328 ntBASIC2.85□□□□□ -1.95
O00370 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.85□□□□□ -1.95
O00370 MTND3P17-201ENST00000416968 344 ntBASIC2.85□□□□□ -1.95
O00370 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.85□□□□□ -1.95
O00370 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.85□□□□□ -1.95
O00370 GPR143P-201ENST00000434155 205 ntBASIC2.85□□□□□ -1.95
O00370 WASF1P1-201ENST00000447560 1131 ntBASIC2.85□□□□□ -1.95
O00370 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.85□□□□□ -1.95
O00370 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.85□□□□□ -1.95
O00370 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.85□□□□□ -1.95
O00370 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.85□□□□□ -1.95
O00370 RPL23AP94-201ENST00000512518 302 ntBASIC2.85□□□□□ -1.95
O00370 MRPS36P2-201ENST00000512569 299 ntBASIC2.85□□□□□ -1.95
O00370 Y_RNA.655-201ENST00000515919 96 ntBASIC2.85□□□□□ -1.95
O00370 RNU6-927P-201ENST00000516199 100 ntBASIC2.85□□□□□ -1.95
O00370 RNU6-445P-201ENST00000516949 107 ntBASIC2.85□□□□□ -1.95
O00370 RNU6-410P-201ENST00000517006 107 ntBASIC2.85□□□□□ -1.95
O00370 MTCO2P4-201ENST00000517968 247 ntBASIC2.85□□□□□ -1.95
O00370 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.85□□□□□ -1.95
O00370 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.85□□□□□ -1.95
O00370 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.85□□□□□ -1.95
O00370 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
O00370 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
O00370 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.85□□□□□ -1.95
O00370 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.85□□□□□ -1.95
O00370 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.85□□□□□ -1.95
O00370 AC245505.1-201ENST00000556398 224 ntBASIC2.85□□□□□ -1.95
O00370 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
O00370 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.85□□□□□ -1.95
O00370 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.85□□□□□ -1.95
O00370 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.85□□□□□ -1.95
O00370 AC098826.3-201ENST00000603823 466 ntBASIC2.85□□□□□ -1.95
O00370 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.85□□□□□ -1.95
O00370 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
O00370 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.85□□□□□ -1.95
O00370 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.85□□□□□ -1.95
O00370 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
O00370 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
O00370 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
O00370 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
O00370 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.84□□□□□ -1.95
O00370 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
O00370 MIR558-201ENST00000384920 94 ntBASIC2.84□□□□□ -1.95
O00370 MIR1-2-201ENST00000384961 85 ntBASIC2.84□□□□□ -1.95
O00370 RNA5SP492-201ENST00000411330 114 ntBASIC2.84□□□□□ -1.95
O00370 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.84□□□□□ -1.95
O00370 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.84□□□□□ -1.95
O00370 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.84□□□□□ -1.95
O00370 PIGFP2-201ENST00000421400 651 ntBASIC2.84□□□□□ -1.95
O00370 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.84□□□□□ -1.95
O00370 AL358075.3-201ENST00000426289 226 ntBASIC2.84□□□□□ -1.95
O00370 ZNF863P-201ENST00000426746 417 ntBASIC2.84□□□□□ -1.95
O00370 AL592045.1-201ENST00000429867 352 ntBASIC2.84□□□□□ -1.95
O00370 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.84□□□□□ -1.95
O00370 AL591212.2-201ENST00000433923 257 ntBASIC2.84□□□□□ -1.95
O00370 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.84□□□□□ -1.95
O00370 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.84□□□□□ -1.95
O00370 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.84□□□□□ -1.95
O00370 CACYBPP2-201ENST00000453625 678 ntBASIC2.84□□□□□ -1.95
O00370 RPL12P25-201ENST00000455592 494 ntBASIC2.84□□□□□ -1.95
O00370 AC007182.2-201ENST00000489251 402 ntBASIC2.84□□□□□ -1.95
O00370 AL160314.1-201ENST00000490836 438 ntBASIC2.84□□□□□ -1.95
O00370 AC091435.1-201ENST00000505442 584 ntBASIC2.84□□□□□ -1.95
O00370 AC117522.1-201ENST00000509821 380 ntBASIC2.84□□□□□ -1.95
O00370 AC108078.2-201ENST00000510750 236 ntBASIC2.84□□□□□ -1.95
O00370 TBCAP3-201ENST00000512475 312 ntBASIC2.84□□□□□ -1.95
O00370 AC010493.1-201ENST00000513479 292 ntBASIC2.84□□□□□ -1.95
O00370 RNU6-677P-201ENST00000516914 101 ntBASIC2.84□□□□□ -1.95
O00370 RN7SKP40-201ENST00000517211 242 ntBASIC2.84□□□□□ -1.95
O00370 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.84□□□□□ -1.95
O00370 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.84□□□□□ -1.95
O00370 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.84□□□□□ -1.95
O00370 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
O00370 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms