Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AC092436.1-201ENST00000506450 503 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 FAM206BP-201ENST00000510179 541 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 APOOP4-201ENST00000513530 597 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AC026801.2-201ENST00000515352 425 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 RNU6-579P-201ENST00000516879 102 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AL133153.1-201ENST00000557756 303 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 SNORD84-203ENST00000584275 78 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 POLR3GP2-201ENST00000588366 668 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 SNRPGP17-201ENST00000603780 214 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AL355802.3-201ENST00000607571 545 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AC013412.1-201ENST00000610687 192 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AC040896.1-201ENST00000613819 479 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AC110801.1-201ENST00000623590 212 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 MTND5P42-201ENST00000637720 498 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AL732372.2-225ENST00000642124 456 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
C4orf47A7E2U8 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.3□□□□□ -1.88
C4orf47A7E2U8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AL035425.3-201ENST00000564206 4996 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 Y_RNA.100-201ENST00000363141 102 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 SNORA62.1-201ENST00000364287 154 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 Y_RNA.301-201ENST00000364990 103 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 RNU4-66P-201ENST00000365199 138 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 SNORA4.3-201ENST00000365564 137 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 Y_RNA.373-201ENST00000365600 103 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 SNORD116-29-201ENST00000384516 83 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 RNU6-1160P-201ENST00000384546 104 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 MIR135A2-201ENST00000384854 100 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AL137014.1-201ENST00000420490 1226 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 BEND7P1-201ENST00000422058 457 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 RPL7L1P10-201ENST00000427790 463 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 RPL35AP22-201ENST00000436855 335 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AC109925.1-201ENST00000478069 331 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AC027575.1-201ENST00000481064 460 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 KLHL2P1-201ENST00000508691 521 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 RNU6-1170P-201ENST00000515974 106 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AC103783.1-201ENST00000520506 373 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AC007151.1-201ENST00000572774 483 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 MIR4775-201ENST00000581168 75 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AC006504.6-201ENST00000590142 199 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 KLKP1-201ENST00000595979 403 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AL627309.6-201ENST00000606857 840 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AC130324.3-201ENST00000614165 542 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AC008121.3-201ENST00000618726 433 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 MTND4LP32-201ENST00000636111 270 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 AC005183.1-201ENST00000603687 1979 ntBASIC3.29□□□□□ -1.88
C4orf47A7E2U8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
C4orf47A7E2U8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
C4orf47A7E2U8 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
C4orf47A7E2U8 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
C4orf47A7E2U8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
C4orf47A7E2U8 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
C4orf47A7E2U8 AL139276.1-201ENST00000311910 1001 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 HSPE1P11-201ENST00000339579 310 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 RNU6-552P-201ENST00000362869 119 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 U3.11-201ENST00000364476 212 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 RNU6-637P-201ENST00000384050 107 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 RNU6-754P-201ENST00000391166 107 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 RNU6-903P-201ENST00000391270 109 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 RNU4-14P-201ENST00000410858 122 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.28□□□□□ -1.88
C4orf47A7E2U8 AC002075.2-201ENST00000425207 252 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 Z82205.1-201ENST00000428456 297 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 RPS3AP52-201ENST00000435639 297 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 AL118520.1-201ENST00000450770 291 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 AC234775.1-201ENST00000454247 670 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 AC126389.1-201ENST00000477436 290 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 AC135721.1-201ENST00000497954 479 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 AC005741.1-201ENST00000511094 432 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.28□□□□□ -1.88
C4orf47A7E2U8 RNU6-559P-201ENST00000516151 98 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 Y_RNA.718-201ENST00000517110 102 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.28□□□□□ -1.88
C4orf47A7E2U8 AC011979.2-201ENST00000527568 352 ntBASIC3.28□□□□□ -1.88
C4orf47A7E2U8 AP002404.1-201ENST00000532005 451 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms