Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 RNU6-322P-201ENST00000516010 103 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 RNU6-229P-201ENST00000516614 102 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AC022616.2-201ENST00000523185 300 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 EEF1B2P4-201ENST00000551398 348 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AL391813.1-201ENST00000603098 260 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 MIR8070-201ENST00000616510 88 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AC024595.1-201ENST00000623088 387 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AC010889.1-201ENST00000566193 2666 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 MTND5P11-201ENST00000511037 1812 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 RNU6-217P-201ENST00000384164 104 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 RNU6-733P-201ENST00000410759 104 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 AL449283.1-202ENST00000418249 604 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 PIGFP2-201ENST00000421400 651 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 AC013410.2-201ENST00000422627 201 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 RPS27P16-201ENST00000425758 201 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 USP9YP24-201ENST00000434374 697 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 AC004865.1-201ENST00000442276 1003 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 AL592447.1-201ENST00000447592 540 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 snoU109.4-201ENST00000458953 143 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 RPS15AP17-201ENST00000470598 390 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 AC018868.1-201ENST00000491307 315 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 AC006390.1-201ENST00000508068 283 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 AC093510.2-201ENST00000562820 896 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 MTND4LP5-201ENST00000605152 292 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 AC135803.1-201ENST00000608748 565 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 MIR6504-201ENST00000613520 61 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
CPSF4LA6NMK7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 RNU6-271P-201ENST00000363858 105 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 Y_RNA.191-201ENST00000363972 113 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 SNORA25B-201ENST00000365507 128 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 POLR2J4-204ENST00000418424 324 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 AC098934.3-201ENST00000430450 190 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 snoU13.9-201ENST00000458927 103 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 AL121594.1-201ENST00000475906 575 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 VPS26AP1-201ENST00000483197 979 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 PSMC1P5-201ENST00000512850 177 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 RNU6-202P-201ENST00000515998 96 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 AL359212.1-201ENST00000556608 614 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 MIR3124-201ENST00000582636 67 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 AC021171.1-201ENST00000603137 706 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 AC010738.1-201ENST00000604970 987 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 AC080013.4-201ENST00000607624 649 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 MIR8074-201ENST00000615081 81 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 AL359740.1-201ENST00000624340 592 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 MTND5P30-201ENST00000452896 1731 ntBASIC0.4□□□□□ -2.35
CPSF4LA6NMK7 RNA5SP347-201ENST00000362445 119 ntBASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 RNU1-36P-201ENST00000365130 165 ntBASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 RNU6-441P-201ENST00000384545 106 ntBASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 MIR10B-201ENST00000385011 110 ntBASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 MIR548J-201ENST00000408833 112 ntBASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 AC069282.1-201ENST00000411911 526 ntBASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 AC010385.1-201ENST00000412374 256 ntBASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 CBX3P6-201ENST00000430257 527 ntBASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 C1DP3-201ENST00000455013 423 ntBASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 AP1S2P1-201ENST00000457344 379 ntBASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 RPS27P22-201ENST00000478056 241 ntBASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 OR5AK1P-201ENST00000524837 922 ntBASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 AC026271.5-201ENST00000577873 130 ntBASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 AC015688.2-201ENST00000584523 262 ntBASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 AL359314.1-201ENST00000616913 261 ntBASIC0.39□□□□□ -2.35
CPSF4LA6NMK7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CPSF4LA6NMK7 MIR302D-201ENST00000362275 68 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms