Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.2□□□□□ -1.9
LINC01548A6NM66 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.2□□□□□ -1.9
LINC01548A6NM66 MED28P6-201ENST00000558776 231 ntBASIC3.2□□□□□ -1.9
LINC01548A6NM66 HMGB3P26-201ENST00000560051 582 ntBASIC3.2□□□□□ -1.9
LINC01548A6NM66 MIR3160-1-201ENST00000577972 85 ntBASIC3.2□□□□□ -1.9
LINC01548A6NM66 MIR5188-201ENST00000583467 113 ntBASIC3.2□□□□□ -1.9
LINC01548A6NM66 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.2□□□□□ -1.9
LINC01548A6NM66 AL158827.2-201ENST00000602494 330 ntBASIC3.2□□□□□ -1.9
LINC01548A6NM66 RNU6-6P-201ENST00000606623 107 ntBASIC3.2□□□□□ -1.9
LINC01548A6NM66 AL021879.1-201ENST00000611756 288 ntBASIC3.2□□□□□ -1.9
LINC01548A6NM66 AL691447.3-201ENST00000635020 330 ntBASIC3.2□□□□□ -1.9
LINC01548A6NM66 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01548A6NM66 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
LINC01548A6NM66 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01548A6NM66 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01548A6NM66 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.2□□□□□ -1.9
LINC01548A6NM66 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01548A6NM66 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01548A6NM66 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01548A6NM66 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01548A6NM66 DEFB108F-201ENST00000344638 222 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 RNY1P16-201ENST00000363063 111 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 SNORD14B-201ENST00000364533 90 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 Y_RNA.533-201ENST00000384596 114 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LINC01548A6NM66 PGBD4P6-201ENST00000421501 610 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 RPL27AP8-201ENST00000424277 446 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 AC007919.1-201ENST00000429380 217 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 RPS15AP10-201ENST00000432472 382 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01548A6NM66 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01548A6NM66 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01548A6NM66 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01548A6NM66 FABP5P15-201ENST00000453566 214 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01548A6NM66 AL583843.1-201ENST00000456070 346 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 SNORD108-201ENST00000459332 71 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 RPS20P22-201ENST00000473700 357 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01548A6NM66 RPL29P14-201ENST00000495837 428 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 AC025554.1-201ENST00000505641 188 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 AC026402.1-201ENST00000513642 170 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01548A6NM66 Y_RNA.687-201ENST00000516558 91 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 Y_RNA.715-201ENST00000517082 110 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.19□□□□□ -1.9
LINC01548A6NM66 AC007991.1-201ENST00000522680 631 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.19□□□□□ -1.9
LINC01548A6NM66 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01548A6NM66 AC040926.1-201ENST00000530195 238 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 TOMM20P2-201ENST00000540082 421 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01548A6NM66 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01548A6NM66 CPDP1-201ENST00000579660 283 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.19□□□□□ -1.9
LINC01548A6NM66 MIR4273-201ENST00000582824 84 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01548A6NM66 AC009314.1-201ENST00000603871 304 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 Z98751.3-201ENST00000604447 521 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 MIR1244-1-201ENST00000612829 85 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 AL442067.1-201ENST00000613261 223 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC01548A6NM66 FP236240.3-201ENST00000623061 327 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 AC008785.1-201ENST00000624475 456 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 MIR1244-3-201ENST00000635744 85 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 MIR1244-2-201ENST00000636449 85 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 MIR1244-4-202ENST00000636813 85 ntBASIC3.19□□□□□ -1.9
LINC01548A6NM66 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01548A6NM66 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01548A6NM66 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01548A6NM66 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01548A6NM66 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01548A6NM66 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01548A6NM66 AC022893.2-201ENST00000564832 3296 ntBASIC3.18□□□□□ -1.9
LINC01548A6NM66 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01548A6NM66 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01548A6NM66 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01548A6NM66 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
LINC01548A6NM66 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01548A6NM66 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01548A6NM66 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01548A6NM66 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01548A6NM66 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01548A6NM66 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC01548A6NM66 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.18□□□□□ -1.9
LINC01548A6NM66 RNU6-379P-201ENST00000363813 104 ntBASIC3.18□□□□□ -1.9
LINC01548A6NM66 U8.8-201ENST00000365399 135 ntBASIC3.18□□□□□ -1.9
LINC01548A6NM66 SNORD14.1-201ENST00000365609 90 ntBASIC3.18□□□□□ -1.9
LINC01548A6NM66 Y_RNA.380-201ENST00000365663 111 ntBASIC3.18□□□□□ -1.9
LINC01548A6NM66 Y_RNA.556-201ENST00000384677 113 ntBASIC3.18□□□□□ -1.9
LINC01548A6NM66 MIR1252-201ENST00000408861 65 ntBASIC3.18□□□□□ -1.9
LINC01548A6NM66 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01548A6NM66 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01548A6NM66 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC01548A6NM66 AL691449.1-201ENST00000426570 421 ntBASIC3.18□□□□□ -1.9
LINC01548A6NM66 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC01548A6NM66 DYNLT3P2-201ENST00000442517 295 ntBASIC3.18□□□□□ -1.9
LINC01548A6NM66 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01548A6NM66 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC01548A6NM66 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms