Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 AL451064.1-201ENST00000607718 471 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 AC012360.2-201ENST00000609349 391 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 AC091304.9-201ENST00000612091 226 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 AC008147.4-201ENST00000617570 1204 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 AL589994.2-201ENST00000621124 579 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 AC022079.1-201ENST00000621546 602 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 AC009878.1-201ENST00000621819 340 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 MIR219B-201ENST00000637023 88 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 RNU5E-6P-201ENST00000365574 115 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 RNU1-138P-201ENST00000384093 164 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 RNU6-39P-201ENST00000384344 107 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 SNORA48.3-201ENST00000391081 134 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 AC092809.3-201ENST00000415453 231 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 SEPT2P1-201ENST00000419651 180 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 RAC1P6-201ENST00000423911 575 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 ISCA1P1-201ENST00000426679 387 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 MTATP6P17-201ENST00000431030 672 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 HMGB3P12-201ENST00000438745 556 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 NEFMP1-201ENST00000443423 1006 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 AL118520.1-201ENST00000450770 291 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 RPS27AP10-201ENST00000496103 208 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 AC010587.1-201ENST00000505809 469 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 AC008716.1-201ENST00000511084 513 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 RNA5SP165-201ENST00000517142 115 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 OSBPL9P5-201ENST00000542581 171 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 RPL21P5-201ENST00000554662 472 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 RPS3AP4-201ENST00000555161 764 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 AC010546.1-201ENST00000569391 485 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 AC239868.4-201ENST00000608318 671 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 AC091931.1-201ENST00000623488 728 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 AL603839.4-201ENST00000624658 1005 ntBASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
SMIM28A0A1B0GU29 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 RNU2-62P-201ENST00000410868 191 ntBASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 AC023141.4-201ENST00000412031 328 ntBASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 BX276092.3-201ENST00000424182 230 ntBASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 MTND6P13-201ENST00000443510 523 ntBASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 RPL26P9-201ENST00000457466 433 ntBASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 MRPS17P3-201ENST00000465453 385 ntBASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 MTND1P3-201ENST00000484956 952 ntBASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 AC114786.4-201ENST00000508771 728 ntBASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 RPPH1-2P-201ENST00000516688 293 ntBASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 RN7SKP40-201ENST00000517211 242 ntBASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 LRRC37A5P-203ENST00000580181 585 ntBASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 AL359999.1-201ENST00000604513 294 ntBASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 RNU6-87P-201ENST00000607561 108 ntBASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 AL137847.3-201ENST00000611521 109 ntBASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 AC010378.1-201ENST00000619270 362 ntBASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 MTND5P29-201ENST00000458676 1807 ntBASIC2.31□□□□□ -2.04
SMIM28A0A1B0GU29 SNORD114-1-201ENST00000362705 72 ntBASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 RNU6-778P-201ENST00000363269 103 ntBASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 RNU6-288P-201ENST00000363690 104 ntBASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 SNORD116-8-201ENST00000384365 95 ntBASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 RNU6-297P-201ENST00000384636 107 ntBASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 MIR888-201ENST00000401186 77 ntBASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 RNU2-49P-201ENST00000410666 184 ntBASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 AC104651.1-201ENST00000427559 735 ntBASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 AL592045.1-201ENST00000429867 352 ntBASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 SNRPGP9-201ENST00000456025 225 ntBASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 BET1P1-201ENST00000482276 359 ntBASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 AC139453.3-201ENST00000493276 369 ntBASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms