Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 AL133216.2-202ENST00000634512 349 ntBASIC0.51□□□□□ -2.33
TRBV6-1A0A0K0K1D8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AL591034.2-201ENST00000402839 359 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 RNU2-68P-201ENST00000410878 191 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC006461.1-201ENST00000412637 326 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 RPS15AP12-201ENST00000419498 388 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 ZNF863P-201ENST00000426746 417 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 TRIM60P13-201ENST00000432350 1283 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 MTND1P33-201ENST00000446251 917 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 HMGN3P1-201ENST00000453847 193 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 RPS26P55-201ENST00000471178 356 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC009268.1-201ENST00000561352 1203 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 SNRPGP17-201ENST00000603780 214 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC004492.1-201ENST00000607036 742 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 uc_338.14-201ENST00000613162 166 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 STMN1P1-201ENST00000617809 440 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC099842.1-201ENST00000619919 596 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 U1.36-201ENST00000620684 176 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AL121890.5-201ENST00000620848 304 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC017104.5-201ENST00000637647 639 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
TRBV6-1A0A0K0K1D8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 RNU6-543P-201ENST00000362576 108 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 SNORD114-27-201ENST00000363766 70 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 MIR421-201ENST00000365696 85 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 MIR597-201ENST00000384968 97 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 MIR100-201ENST00000385259 80 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AL139098.1-201ENST00000407291 389 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 Y_RNA.595-201ENST00000410403 105 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC069282.1-201ENST00000411911 526 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 BEND7P1-201ENST00000422058 457 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 MTCO2P20-201ENST00000437339 673 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC098831.1-201ENST00000440661 216 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 CALM1P1-201ENST00000442082 433 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 CYP2C59P-201ENST00000457790 269 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 TOMM22P6-201ENST00000465035 409 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC109927.2-201ENST00000506416 303 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 RN7SKP265-201ENST00000516448 223 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 HIGD1AP6-201ENST00000521833 279 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 LSM6P2-201ENST00000552208 177 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC012414.6-201ENST00000568241 401 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 RN7SL622P-201ENST00000585292 275 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 SUMO2P14-201ENST00000604488 293 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC211469.2-201ENST00000605461 205 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AL355472.4-201ENST00000610233 626 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC012676.2-201ENST00000619258 186 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AP003400.6-201ENST00000624698 740 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AL391516.1-201ENST00000554380 2449 ntBASIC0.49□□□□□ -2.33
TRBV6-1A0A0K0K1D8 RBBP8P1-201ENST00000449447 1844 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 RNU6-1222P-201ENST00000384615 107 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AL109755.1-201ENST00000401791 649 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 RNA5SP100-201ENST00000410903 110 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 RNA5SP59-201ENST00000410922 110 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 UBE2V2P3-201ENST00000433562 437 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC006512.1-201ENST00000468816 291 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC117454.1-201ENST00000491120 168 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 RPS27AP10-201ENST00000496103 208 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 TRMT112P2-201ENST00000512910 132 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC008837.2-201ENST00000513076 418 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 ACA64.5-201ENST00000516207 127 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 COPS8P3-201ENST00000526024 482 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AP006587.4-201ENST00000526053 529 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 CYCSP27-201ENST00000527643 293 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC124293.1-201ENST00000530034 493 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 CR383656.7-201ENST00000548164 174 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC021739.1-201ENST00000559631 174 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AC002400.1-201ENST00000569310 726 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.48□□□□□ -2.33
TRBV6-1A0A0K0K1D8 AL078604.3-201ENST00000615580 211 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms