Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV30A0A087WSZ9 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV30A0A087WSZ9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV30A0A087WSZ9 RNA5SP458-201ENST00000516188 119 ntBASIC0.67□□□□□ -2.3
TRAV30A0A087WSZ9 SNORA31.16-201ENST00000516773 139 ntBASIC0.67□□□□□ -2.3
TRAV30A0A087WSZ9 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV30A0A087WSZ9 CENPUP1-201ENST00000526649 1202 ntBASIC0.67□□□□□ -2.3
TRAV30A0A087WSZ9 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV30A0A087WSZ9 AC125611.1-201ENST00000549563 229 ntBASIC0.67□□□□□ -2.3
TRAV30A0A087WSZ9 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV30A0A087WSZ9 AL136313.1-201ENST00000624804 202 ntBASIC0.67□□□□□ -2.3
TRAV30A0A087WSZ9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TRAV30A0A087WSZ9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TRAV30A0A087WSZ9 ICE2P2-201ENST00000483823 2787 ntBASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 AL136133.1-201ENST00000413694 376 ntBASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 AC013410.2-201ENST00000422627 201 ntBASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 AC103851.1-201ENST00000506833 274 ntBASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 RNU6-351P-201ENST00000516097 100 ntBASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 HIGD1AP6-201ENST00000521833 279 ntBASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 CR383656.7-201ENST00000548164 174 ntBASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 MIR4653-201ENST00000585107 83 ntBASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 AL671309.1-201ENST00000603750 544 ntBASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 AC011374.2-201ENST00000607135 526 ntBASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 AL078604.3-201ENST00000615580 211 ntBASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 MIR6715A-201ENST00000615929 79 ntBASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 AC092608.3-201ENST00000625017 386 ntBASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 AC008163.1-202ENST00000636004 2889 ntBASIC0.66□□□□□ -2.3
TRAV30A0A087WSZ9 RNU6-392P-201ENST00000364926 101 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 MIR515-2-201ENST00000384883 83 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 MIR515-1-201ENST00000384884 83 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 RNU11-5P-201ENST00000391216 129 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 PIGFP2-201ENST00000421400 651 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 AC008850.1-201ENST00000427546 362 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 AL592045.1-201ENST00000429867 352 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 MTCO1P44-201ENST00000441935 243 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 RPS4XP11-201ENST00000446897 772 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 MIR4661-201ENST00000582720 75 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 CYP2C61P-201ENST00000604072 290 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 SUMO2P14-201ENST00000604488 293 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 AC080078.3-201ENST00000605407 463 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 AC211469.2-201ENST00000605461 205 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 AL020996.3-201ENST00000606617 222 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 AC092953.2-201ENST00000608000 699 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 AC012360.2-201ENST00000609349 391 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 AP005229.2-201ENST00000609980 697 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 MIR6866-201ENST00000638146 69 ntBASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.65□□□□□ -2.31
TRAV30A0A087WSZ9 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
TRAV30A0A087WSZ9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
TRAV30A0A087WSZ9 RNU1-36P-201ENST00000365130 165 ntBASIC0.64□□□□□ -2.31
TRAV30A0A087WSZ9 RNU6-53P-201ENST00000365367 106 ntBASIC0.64□□□□□ -2.31
TRAV30A0A087WSZ9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
TRAV30A0A087WSZ9 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
TRAV30A0A087WSZ9 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.64□□□□□ -2.31
TRAV30A0A087WSZ9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV30A0A087WSZ9 AC018437.1-201ENST00000492214 406 ntBASIC0.64□□□□□ -2.31
TRAV30A0A087WSZ9 BOLA3P3-201ENST00000505182 232 ntBASIC0.64□□□□□ -2.31
TRAV30A0A087WSZ9 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV30A0A087WSZ9 NACAP3-201ENST00000552100 481 ntBASIC0.64□□□□□ -2.31
TRAV30A0A087WSZ9 FAM71BP1-201ENST00000604431 523 ntBASIC0.64□□□□□ -2.31
TRAV30A0A087WSZ9 AP005212.4-201ENST00000614206 710 ntBASIC0.64□□□□□ -2.31
TRAV30A0A087WSZ9 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV30A0A087WSZ9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.64□□□□□ -2.31
TRAV30A0A087WSZ9 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV30A0A087WSZ9 Z75746.1-201ENST00000440243 2080 ntBASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 HSBP1P2-201ENST00000299671 229 ntBASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 MIR597-201ENST00000384968 97 ntBASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 AC078974.1-201ENST00000411597 223 ntBASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 PGBD4P5-201ENST00000445958 426 ntBASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 AC079140.2-201ENST00000506193 142 ntBASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 AC124293.1-201ENST00000530034 493 ntBASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 ZNF705CP-201ENST00000530515 889 ntBASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 AL731537.2-201ENST00000561565 951 ntBASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 AC073544.2-201ENST00000601155 540 ntBASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 AL359821.1-201ENST00000605519 182 ntBASIC0.63□□□□□ -2.31
TRAV30A0A087WSZ9 RNU1-124P-201ENST00000363861 145 ntBASIC0.62□□□□□ -2.31
TRAV30A0A087WSZ9 RNU6-1080P-201ENST00000383982 107 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms