Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ClcnkaQ9WUB7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ClcnkaQ9WUB7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClcnkaQ9WUB7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
ClcnkaQ9WUB7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Gm9013-201ENSMUST00000132939 882 ntBASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ClcnkaQ9WUB7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms