Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIPA1Q96FS4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 AL136038.3-201ENST00000561909 1096 ntBASIC19.07■□□□□ 0.64
SIPA1Q96FS4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 AC116407.4-201ENST00000623319 1061 ntBASIC19.07■□□□□ 0.64
SIPA1Q96FS4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.07■□□□□ 0.64
SIPA1Q96FS4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 ZNF444P1-201ENST00000559497 298 ntBASIC19.06■□□□□ 0.64
SIPA1Q96FS4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SIPA1Q96FS4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 LINC01311-201ENST00000565162 1445 ntBASIC19.05■□□□□ 0.64
SIPA1Q96FS4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIPA1Q96FS4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIPA1Q96FS4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIPA1Q96FS4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIPA1Q96FS4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIPA1Q96FS4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIPA1Q96FS4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.04■□□□□ 0.64
SIPA1Q96FS4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIPA1Q96FS4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.04■□□□□ 0.64
SIPA1Q96FS4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SIPA1Q96FS4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
SIPA1Q96FS4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.04■□□□□ 0.64
SIPA1Q96FS4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.04■□□□□ 0.64
SIPA1Q96FS4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.04■□□□□ 0.64
SIPA1Q96FS4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIPA1Q96FS4 AC083849.1-201ENST00000615227 514 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms