Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.7■□□□□ 0.42
Ush1gQ80T11 Gm44359-201ENSMUST00000200671 138 ntBASIC17.7■□□□□ 0.42
Ush1gQ80T11 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.7■□□□□ 0.42
Ush1gQ80T11 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1gQ80T11 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1gQ80T11 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1gQ80T11 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1gQ80T11 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ush1gQ80T11 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.7■□□□□ 0.42
Ush1gQ80T11 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1gQ80T11 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1gQ80T11 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1gQ80T11 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1gQ80T11 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1gQ80T11 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1gQ80T11 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1gQ80T11 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
Ush1gQ80T11 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1gQ80T11 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1gQ80T11 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1gQ80T11 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1gQ80T11 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1gQ80T11 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1gQ80T11 Gm12350-201ENSMUST00000121208 462 ntBASIC17.69■□□□□ 0.42
Ush1gQ80T11 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Ush1gQ80T11 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.69■□□□□ 0.42
Ush1gQ80T11 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1gQ80T11 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1gQ80T11 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1gQ80T11 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1gQ80T11 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1gQ80T11 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1gQ80T11 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1gQ80T11 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1gQ80T11 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1gQ80T11 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Ush1gQ80T11 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.67■□□□□ 0.42
Ush1gQ80T11 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1gQ80T11 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1gQ80T11 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1gQ80T11 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1gQ80T11 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1gQ80T11 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1gQ80T11 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1gQ80T11 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1gQ80T11 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1gQ80T11 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1gQ80T11 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1gQ80T11 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Ush1gQ80T11 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Gm13216-201ENSMUST00000117145 591 ntBASIC17.66■□□□□ 0.42
Ush1gQ80T11 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Gm5364-201ENSMUST00000216789 889 ntBASIC17.66■□□□□ 0.42
Ush1gQ80T11 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.66■□□□□ 0.42
Ush1gQ80T11 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ush1gQ80T11 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.66■□□□□ 0.42
Ush1gQ80T11 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1gQ80T11 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1gQ80T11 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1gQ80T11 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms