Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox17Q61473 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox17Q61473 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Sox17Q61473 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox17Q61473 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox17Q61473 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox17Q61473 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox17Q61473 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox17Q61473 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox17Q61473 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.26■□□□□ 0.03
Sox17Q61473 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.26■□□□□ 0.03
Sox17Q61473 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.26■□□□□ 0.03
Sox17Q61473 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox17Q61473 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox17Q61473 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox17Q61473 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox17Q61473 Asic1-205ENSMUST00000228185 1818 ntBASIC15.26■□□□□ 0.03
Sox17Q61473 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sox17Q61473 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox17Q61473 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox17Q61473 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox17Q61473 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Sox17Q61473 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.25■□□□□ 0.03
Sox17Q61473 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sox17Q61473 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Gm12085-201ENSMUST00000119263 940 ntBASIC15.25■□□□□ 0.03
Sox17Q61473 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.25■□□□□ 0.03
Sox17Q61473 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Sox17Q61473 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.25■□□□□ 0.03
Sox17Q61473 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox17Q61473 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Sox17Q61473 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Sox17Q61473 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.24■□□□□ 0.03
Sox17Q61473 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 Gm7638-201ENSMUST00000121348 967 ntBASIC15.24■□□□□ 0.03
Sox17Q61473 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.24■□□□□ 0.03
Sox17Q61473 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.24■□□□□ 0.03
Sox17Q61473 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Sox17Q61473 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.24■□□□□ 0.03
Sox17Q61473 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Sox17Q61473 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sox17Q61473 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox17Q61473 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Sox17Q61473 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox17Q61473 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox17Q61473 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sox17Q61473 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox17Q61473 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox17Q61473 Gm18958-201ENSMUST00000174258 762 ntBASIC15.23■□□□□ 0.03
Sox17Q61473 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox17Q61473 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox17Q61473 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox17Q61473 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.23■□□□□ 0.03
Sox17Q61473 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox17Q61473 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox17Q61473 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox17Q61473 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox17Q61473 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox17Q61473 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox17Q61473 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sox17Q61473 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sox17Q61473 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox17Q61473 Sybu-209ENSMUST00000228639 4113 ntBASIC15.23■□□□□ 0.03
Sox17Q61473 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sox17Q61473 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox17Q61473 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms