Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Gm42901-201ENSMUST00000197735 3171 ntBASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Gm10620-201ENSMUST00000098379 1332 ntBASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav3-1Q5R1I8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Gm37820-201ENSMUST00000194021 2147 ntBASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-1Q5R1I8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-1Q5R1I8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms