Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Sybu-209ENSMUST00000228639 4113 ntBASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Gm6420-201ENSMUST00000193885 723 ntBASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-3Q5R1C3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-3Q5R1C3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav3-3Q5R1C3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav3-3Q5R1C3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-3Q5R1C3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav3-3Q5R1C3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Trav3-3Q5R1C3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-3Q5R1C3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav3-3Q5R1C3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-3Q5R1C3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-3Q5R1C3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-3Q5R1C3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-3Q5R1C3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-3Q5R1C3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav3-3Q5R1C3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Gm10418-201ENSMUST00000100943 576 ntBASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Gm7290-201ENSMUST00000104990 617 ntBASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Gm12918-201ENSMUST00000120234 636 ntBASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Gm15710-201ENSMUST00000121821 636 ntBASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 Gm5075-201ENSMUST00000196916 622 ntBASIC12.19□□□□□ -0.46
Trav3-3Q5R1C3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms