Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN6P56747 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN6P56747 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.27■□□□□ 0.52
CLDN6P56747 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CLDN6P56747 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN6P56747 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN6P56747 KRT8P10-201ENST00000450021 1447 ntBASIC18.27■□□□□ 0.52
CLDN6P56747 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN6P56747 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN6P56747 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.27■□□□□ 0.52
CLDN6P56747 AC009078.2-202ENST00000463353 338 ntBASIC18.27■□□□□ 0.52
CLDN6P56747 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN6P56747 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN6P56747 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN6P56747 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN6P56747 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN6P56747 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.27■□□□□ 0.51
CLDN6P56747 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.27■□□□□ 0.51
CLDN6P56747 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.27■□□□□ 0.51
CLDN6P56747 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.27■□□□□ 0.51
CLDN6P56747 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN6P56747 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN6P56747 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN6P56747 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN6P56747 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN6P56747 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN6P56747 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLDN6P56747 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN6P56747 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN6P56747 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLDN6P56747 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN6P56747 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.26■□□□□ 0.51
CLDN6P56747 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLDN6P56747 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDN6P56747 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN6P56747 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CLDN6P56747 AC111152.3-201ENST00000569699 673 ntBASIC18.26■□□□□ 0.51
CLDN6P56747 AC011498.5-201ENST00000592027 486 ntBASIC18.26■□□□□ 0.51
CLDN6P56747 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLDN6P56747 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDN6P56747 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN6P56747 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLDN6P56747 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLDN6P56747 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN6P56747 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN6P56747 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN6P56747 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN6P56747 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN6P56747 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN6P56747 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CLDN6P56747 AC073130.3-201ENST00000624389 2278 ntBASIC18.26■□□□□ 0.51
CLDN6P56747 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN6P56747 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN6P56747 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN6P56747 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN6P56747 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN6P56747 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.26■□□□□ 0.51
CLDN6P56747 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN6P56747 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN6P56747 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN6P56747 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN6P56747 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN6P56747 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN6P56747 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN6P56747 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN6P56747 AC004870.1-201ENST00000315132 882 ntBASIC18.25■□□□□ 0.51
CLDN6P56747 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN6P56747 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.25■□□□□ 0.51
CLDN6P56747 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN6P56747 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CLDN6P56747 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN6P56747 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN6P56747 AP002414.4-201ENST00000589764 1148 ntBASIC18.25■□□□□ 0.51
CLDN6P56747 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN6P56747 AL732292.2-201ENST00000609649 430 ntBASIC18.25■□□□□ 0.51
CLDN6P56747 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN6P56747 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CLDN6P56747 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN6P56747 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN6P56747 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN6P56747 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CLDN6P56747 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN6P56747 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CLDN6P56747 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN6P56747 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CLDN6P56747 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN6P56747 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN6P56747 AP005212.1-201ENST00000581547 1997 ntBASIC18.24■□□□□ 0.51
CLDN6P56747 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN6P56747 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN6P56747 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN6P56747 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN6P56747 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms