Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.6□□□□□ -0.71
Xcl1P47993 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC10.6□□□□□ -0.71
Xcl1P47993 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC10.6□□□□□ -0.71
Xcl1P47993 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Xcl1P47993 Gm11960-202ENSMUST00000181063 2858 ntBASIC10.6□□□□□ -0.71
Xcl1P47993 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC10.6□□□□□ -0.71
Xcl1P47993 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Xcl1P47993 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Xcl1P47993 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC10.59□□□□□ -0.71
Xcl1P47993 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Xcl1P47993 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC10.59□□□□□ -0.71
Xcl1P47993 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC10.59□□□□□ -0.71
Xcl1P47993 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC10.59□□□□□ -0.71
Xcl1P47993 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC10.59□□□□□ -0.71
Xcl1P47993 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Xcl1P47993 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Xcl1P47993 Gm42473-201ENSMUST00000201056 2291 ntBASIC10.59□□□□□ -0.71
Xcl1P47993 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Xcl1P47993 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Xcl1P47993 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Xcl1P47993 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC10.58□□□□□ -0.72
Xcl1P47993 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC10.58□□□□□ -0.72
Xcl1P47993 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC10.58□□□□□ -0.72
Xcl1P47993 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Gm16425-201ENSMUST00000118143 3130 ntBASIC10.58□□□□□ -0.72
Xcl1P47993 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Xcl1P47993 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Xcl1P47993 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Xcl1P47993 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Xcl1P47993 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Xcl1P47993 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Xcl1P47993 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms