Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cbx3P23198 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cbx3P23198 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cbx3P23198 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cbx3P23198 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cbx3P23198 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.83□□□□□ -0.04
Cbx3P23198 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.83□□□□□ -0.04
Cbx3P23198 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.83□□□□□ -0.04
Cbx3P23198 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cbx3P23198 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cbx3P23198 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cbx3P23198 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cbx3P23198 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cbx3P23198 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cbx3P23198 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cbx3P23198 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cbx3P23198 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cbx3P23198 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cbx3P23198 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cbx3P23198 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Cbx3P23198 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cbx3P23198 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cbx3P23198 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cbx3P23198 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cbx3P23198 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.82□□□□□ -0.04
Cbx3P23198 Nespas-201ENSMUST00000143738 1083 ntBASIC14.82□□□□□ -0.04
Cbx3P23198 Gm22325-201ENSMUST00000158904 308 ntBASIC14.82□□□□□ -0.04
Cbx3P23198 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.82□□□□□ -0.04
Cbx3P23198 Gm6420-201ENSMUST00000193885 723 ntBASIC14.82□□□□□ -0.04
Cbx3P23198 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.82□□□□□ -0.04
Cbx3P23198 Gm5874-201ENSMUST00000096101 508 ntBASIC14.82□□□□□ -0.04
Cbx3P23198 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cbx3P23198 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cbx3P23198 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cbx3P23198 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cbx3P23198 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.81□□□□□ -0.04
Cbx3P23198 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.81□□□□□ -0.04
Cbx3P23198 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
Cbx3P23198 Gm42642-201ENSMUST00000200683 355 ntBASIC14.81□□□□□ -0.04
Cbx3P23198 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.81□□□□□ -0.04
Cbx3P23198 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.81□□□□□ -0.04
Cbx3P23198 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cbx3P23198 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.81□□□□□ -0.04
Cbx3P23198 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cbx3P23198 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cbx3P23198 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cbx3P23198 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cbx3P23198 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cbx3P23198 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cbx3P23198 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cbx3P23198 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cbx3P23198 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cbx3P23198 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.8□□□□□ -0.04
Cbx3P23198 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cbx3P23198 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cbx3P23198 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cbx3P23198 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.8□□□□□ -0.04
Cbx3P23198 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cbx3P23198 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cbx3P23198 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cbx3P23198 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms