Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.88□□□□□ -0.51
TcraP01849 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.88□□□□□ -0.51
TcraP01849 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Gm12933-201ENSMUST00000120203 872 ntBASIC11.88□□□□□ -0.51
TcraP01849 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC11.88□□□□□ -0.51
TcraP01849 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Gm44549-201ENSMUST00000208351 577 ntBASIC11.88□□□□□ -0.51
TcraP01849 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
TcraP01849 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
TcraP01849 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
TcraP01849 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
TcraP01849 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
TcraP01849 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TcraP01849 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
TcraP01849 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
TcraP01849 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
TcraP01849 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
TcraP01849 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
TcraP01849 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.87□□□□□ -0.51
TcraP01849 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
TcraP01849 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.87□□□□□ -0.51
TcraP01849 Rab3c-203ENSMUST00000224180 967 ntBASIC11.87□□□□□ -0.51
TcraP01849 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
TcraP01849 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.87□□□□□ -0.51
TcraP01849 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TcraP01849 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
TcraP01849 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TcraP01849 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.86□□□□□ -0.51
TcraP01849 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TcraP01849 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
TcraP01849 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TcraP01849 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TcraP01849 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TcraP01849 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Gm26524-201ENSMUST00000192339 390 ntBASIC11.86□□□□□ -0.51
TcraP01849 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.86□□□□□ -0.51
TcraP01849 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
TcraP01849 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms