Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm13186-201ENSMUST00000118031 316 ntBASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm45328-201ENSMUST00000210942 917 ntBASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm16499-203ENSMUST00000204633 2177 ntBASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Phf7-203ENSMUST00000226565 1971 ntBASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-1A0A0G2JEU8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms