Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv16A0A0B4J1H3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Gm715-201ENSMUST00000117865 831 ntBASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Gm13168-201ENSMUST00000121771 632 ntBASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Gm21814-202ENSMUST00000203277 873 ntBASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv16A0A0B4J1H3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.73□□□□□ -0.53
Trbv16A0A0B4J1H3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms