Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Gm27742-201ENSMUST00000184667 60 ntBASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Gm18115-201ENSMUST00000221209 621 ntBASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Wnt10b-204ENSMUST00000226655 1807 ntBASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Gm16499-203ENSMUST00000204633 2177 ntBASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13d-1A0A075B606 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13d-1A0A075B606 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Dancr-204ENSMUST00000132389 2347 ntBASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms